Pelagovum pacificum: I8N54_00790
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Entry
I8N54_00790 CDS
T06971
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf00630
Glyoxylate and dicarboxylate metabolism
ppaf00680
Methane metabolism
ppaf01100
Metabolic pathways
ppaf01120
Microbial metabolism in diverse environments
ppaf01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
I8N54_00790 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
I8N54_00790 (fdhF)
Enzymes [BR:
ppaf01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
I8N54_00790 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer4_8
Fer4
Fer4_6
Fer4_21
Fer4_17
Fer4_10
Fer4_9
Fer4_16
Fer4_4
Fer4_2
Fer4_22
Fer4_15
Fer4_18
DUF4350
Motif
Other DBs
NCBI-ProteinID:
QQA43146
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All DBs
Position
155260..158037
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AA seq
925 aa
AA seq
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MTDSIRFTLDGREVEAAPGETIWQVAKREGTTIPHLCHKDAPGYRSDGNCRACMVAIDGE
RNLVASCIREPSADMKVTTGEPREVQARKLVMELLMADQPERDAAHDRSSHMWEMAEAQG
VEQSRFPSMDADHVPLLDDSHVAMRVNLDACIQCGLCVRACREVQVNDVIGMAGRGHEAF
PVFDMDDPMGASTCVACGECVQACPTGALMPSSVLDERQIGDSADYDREVDSVCPFCGVG
CQVSLKVKDDRIVYVDGIDGPANEGRLCVKGRFGFDYIHHPHRLTRPMIRREDAPAKGLN
VDPANPWTHFREATWDEALEFAAAGLSSLKAERGGKAVAGFGSAKCTNEEAYLFQKLIRQ
GFGHNNVDHCTRLCHASSVAALMENVGSAAVTATFNQIEKADVAIVIGANPVENHPVAAT
YFKQFTKRGGKLIVMDPRGVGLRRFSSHMLQFRPGADVALLNSIMHVIAEEGLYDQQYID
GYTENWEAEKAHLAGFRPEDMESLTGIDADTIRDVARTFAGAEKGMIFWGMGISQHIHGT
DNSRCLISLALMCGHVGREGTGLHPLRGQNNVQGASDAGLIPMFLPDYQSVTDDGVRSAF
SEIWHSGDFSAEKGLTVTEIMDAVHDGQIAGMYVLGENPAMSDPDVDHARDALAKLDHLI
VQDIFLTETANYADVILPASAFAEKTGTVTNTNRQVQMGRPAVAPPGEAREDWRITVDLA
KRIGLPWDYGHPSEIYEEMARGMRSLDNITWDRLERGAVTYPSLSPDDPGQPIVFGDGFP
REGGRAKFTPASVIPPDEVPDTEYPMVLTTGRQLEHWHTGSMTRRSRVLDAVEPEANCSL
HPSTLRKLGVAPGDMVRLSTRRGSIEIMAREDRAVSPDMVFLPFAYVEAAANLLTNPAID
PYGKIPEFKFSAVKVEAVGNSVAAE
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacagtatccgattcaccctcgacggccgcgaggtcgaggccgcgccgggggag
accatctggcaggtcgcgaagcgggaaggcacgaccattccgcacctctgccacaaggat
gcgccgggctatcgctcggacggcaactgccgcgcctgcatggtcgcgatcgacggggaa
cggaacctcgtcgcgtcctgcatccgcgagccgtccgccgacatgaaggtcaccaccgga
gagccgcgtgaggtgcaggctcgcaagctggtgatggaattgctgatggccgaccagcca
gagcgggacgcggcgcacgaccggtcctcgcacatgtgggagatggccgaagcgcagggc
gtggaacagagccgtttcccgtcgatggatgccgaccacgtgccgcttctcgacgacagc
cacgtcgcgatgcgtgtgaacctcgatgcctgcatccagtgcgggctttgcgtccgcgcc
tgccgcgaggtgcaggtcaacgacgtgatcggcatggcgggccgggggcacgaggccttc
ccggtgttcgacatggacgacccgatgggcgcatcgacctgcgtggcctgcggcgagtgc
gtgcaggcctgtccgaccggcgcactgatgccgtcgagcgtgctggacgagcgccagatc
ggtgacagcgccgactatgatcgcgaggtcgacagcgtctgcccgttctgcggcgtcggc
tgccaggtgtcgctgaaggtgaaggacgaccggatcgtctatgtcgacggcatcgacggc
cccgccaacgaagggcggctctgcgtgaaggggcgcttcggcttcgattacatccaccac
ccgcaccgcctgacccggccgatgatccggcgcgaggatgcgcccgcgaaggggctgaac
gtcgatccggcaaacccctggacccacttccgcgaggcgacgtgggacgaggcgctggag
ttcgctgctgccgggctgtcgtcgctgaaggcggagcgtggcggcaaggcggtggccggg
ttcggctctgccaaatgcacgaatgaagaggcctatctcttccagaagctgatccggcag
ggcttcgggcacaacaacgtcgaccattgcacgcggctttgccacgcctcttcggtcgcg
gcgctgatggagaatgtcggctccgccgccgtgacagcgacgttcaaccagatcgagaag
gcggacgtcgccatcgtcatcggggccaacccggtggagaaccatcccgtcgcggcgacc
tacttcaagcagttcaccaagcgcggcggcaagctcatcgtcatggatccgcgcggcgtc
gggctgcggcgcttctcgtcgcacatgctgcagttccggccgggggccgacgtggcgctg
ctgaactcgatcatgcacgtgatcgcggaagaggggctttacgatcagcaatatatcgac
ggctacaccgagaactgggaggcggagaaggcgcacctcgccgggttccgccccgaggac
atggagagcctgaccgggatcgacgcggatacgatccgcgacgtggcccggaccttcgcc
ggggcggagaaggggatgatcttctggggcatggggatcagccagcacatccacggcacc
gacaactcgcgctgcctgatctcgctggcgctgatgtgcgggcatgtcgggcgtgagggc
acgggtctgcacccgctgcgcgggcagaacaacgtgcagggcgcgtctgacgccgggctg
atcccgatgttcctgccggactaccagtcggtgacggacgacggcgtccgctccgccttc
tcggagatctggcactcgggcgacttctccgccgagaaggggctgacggtcaccgagatc
atggatgccgtgcacgacgggcagatcgcggggatgtatgtcctcggcgagaacccggcg
atgtcggacccggatgtcgaccatgcgcgcgacgcgctcgcgaagctcgaccacctcatc
gtgcaggacatcttcctgaccgagacggcgaactatgccgacgtgatcctgcccgcctcg
gccttcgccgagaagactgggaccgtcaccaacaccaaccggcaggtccagatgggtcgg
cccgccgtcgcgccgcccggcgaagcccgtgaggactggcggatcacagtcgatctcgcg
aagcgtatcggactgccgtgggactacggacacccgtccgaaatctacgaggagatggcg
cgcgggatgcgctcgctcgacaatatcacctgggaccggctggagcgtggggcggtcacc
tacccgtcgctgtcgccggacgatcccggacagccgatcgttttcggcgatggcttcccg
cgcgagggcggacgggcgaagttcacgccggccagtgtcattccaccggacgaagtcccg
gacaccgagtatccgatggtgcttacaacggggcggcagctggagcattggcacaccggg
tcgatgacccggcgatcccgtgtgctggacgcagtggagcctgaagcgaactgttccctg
cacccgtcgaccctgcgcaagctgggcgttgcgccgggggacatggtgcgtctgagcacg
cggcgcggttcgatcgagatcatggcgcgggaagatcgggctgtgtcgcctgacatggtg
ttcctgccgttcgcctatgtcgaagcagcggcaaacctgctgacgaaccccgcgatcgac
ccgtatggcaagattcccgagttcaagttctctgccgtgaaggtcgaagcggtcggaaac
agcgtcgcggccgagtag
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