Pelagovum pacificum: I8N54_08170
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Entry
I8N54_08170 CDS
T06971
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf03030
DNA replication
ppaf03430
Mismatch repair
ppaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I8N54_08170 (ssb)
03430 Mismatch repair
I8N54_08170 (ssb)
03440 Homologous recombination
I8N54_08170 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppaf03032
]
I8N54_08170 (ssb)
03400 DNA repair and recombination proteins [BR:
ppaf03400
]
I8N54_08170 (ssb)
03029 Mitochondrial biogenesis [BR:
ppaf03029
]
I8N54_08170 (ssb)
DNA replication proteins [BR:
ppaf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
I8N54_08170 (ssb)
DNA repair and recombination proteins [BR:
ppaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
I8N54_08170 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
I8N54_08170 (ssb)
Mitochondrial biogenesis [BR:
ppaf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
I8N54_08170 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
Motif
Other DBs
NCBI-ProteinID:
QQA44531
LinkDB
All DBs
Position
complement(1654411..1654935)
Genome browser
AA seq
174 aa
AA seq
DB search
MAGSVNKVILIGNLGRDPETRTFQNGGKVCNLRIATSENWKDRNTGERRERTEWHSVAIF
SEPLVRVAEQYLKKGSKVYIEGQLETRKWQDQSGQDRYSTEVVLRPYTSTLTMLDGRGEG
GGGGGGGGYSDDRGGYGGGNGGGGGYGGGNQGGGGGGGYGGPSGGGDLDDEIPF
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggctggcagcgtcaacaaggtcatcctcatcggcaatctcggccgtgatcccgagacg
aggacgttccagaacgggggcaaggtctgcaacctgcggatcgcgacctccgagaactgg
aaggatcgcaacaccggcgagcggcgcgaacggaccgagtggcactcggtcgccatcttc
tccgaaccgctggtccgcgtggccgagcagtatctgaagaagggctccaaggtttacatc
gaaggccagctcgagacccgcaagtggcaggaccagtccggccaggatcgctacagcacc
gaagtcgtgctgcggccctacacttccacgctgaccatgctcgacgggcgtggtgaaggc
ggcggcggtggtggcggcggtggctactccgacgaccgtggcggctatggtggcggcaac
ggcggtggcggtggctacggcggcggcaatcagggcggcggcggcggaggcggctacggc
ggcccgtccggcggcggcgatctggacgacgagatcccgttctga
DBGET
integrated database retrieval system
