Pectobacterium parmentieri RNS08.42.1A: A8F97_05735 Help Entry A8F97_05735       CDS       T04513                                  Name (GenBank) ATP-dependent RNA helicase HrpA   KO K03578   ATP-dependent helicase HrpA [EC:5.6.2.6] Organism ppar  Pectobacterium parmentieri RNS08.42.1A Brite KEGG Orthology (KO) [BR:ppar00001]  09190 Not Included in Pathway or Brite   09191 Unclassified: metabolism    99980 Enzymes with EC numbers     A8F97_05735 Enzymes [BR:ppar01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      A8F97_05735 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF3418 OB_NTP_bind Helicase_C HA2_C DEAD AAA_22 T2SSE AAA_19 HA2_N nSTAND3 NACHT PhoH Zeta_toxin Motif Other DBs NCBI-ProteinID:  AOR58403 LinkDB All DBs Position 1292763..1296605 Genome browser AA seq 1280 aa AA seqDB search MLRDRQRLRRRLQGAAKVSSPQAQAAIAQEIEGEIVAARQKVENRRASCPTIHYPEQLPV SQKKDEILEALRHHQVIIVAGETGSGKTTQLPKICLELGRGVHGLIGHTQPRRLAARTVA DRIAAELETPLGGSVGYKVRFNDQVGDNTLVKLMTDGILLAEIQQDRLLMQYDTLIIDEA HERSLNIDFIMGYLRQLLPKRPDLKVIITSATIDPQRFSRHFNHAPIIEVSGRTYPVDVR YRPVVEDADDSERDQLQAIFDAVDELTREGPGDILVFMSGEREIRDTAEALTRLDLPHTE ILPLYARLSNQEQNRVFQSHHGRRIVLATNVAETSLTVPGIRYVIDPGTARISRYSFRTK VQRLPIEPVSQASANQRKGRCGRVAAGVCIRLYSEQDFLSRPEFTDPEILRTNLASVILQ MTSLGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIHLAENGHYHLTPQGQQLAQLPIDP RLARMVLEARKMGCVREVMVITAALSIQDPRERPMDKKQASDEKHRRFADKDSDFLAFVN LWDYLREQQKALSSSQFRRQCRTDFLNYLRVREWQDIYTQLRQVVKELGLPVNSEPADYL SIHCSLLTGLLSHIGQKDIEKQEFSGARNARFAIFPGSGLFKKPPKWTMVAELVETSRLW GRIAARIEPEWIEPLAPHLIKRSYSDPHWEKAQGTVMAQEKVTLFGLPIVAARKVNYSSI DPTLAREMFIRHALVEGDWQTHHAFFRANLKLLAEVEDLEHKSRRRDILVDDETLFAFYD RRLPHDVVSSRHFDKWWKGASRDNADLLNFEKSMLIKDGAEKVSALDYPNFWHQDNLKLR LSYQFEPGTDADGVTVHIPLPILNQVREEGFEWQIPGVRRELAIALIKSLPKPLRRNFVP APNYAEAFLARTTPLEKGLLDALERELRLMTGVTVPREAWQWDQVPDHLKITFRVIDEKN RTQREGKELSALKDQLKDKVQQTLSSVVDDGLEQRGLHVWSFGSLPDCYEQKRGGYSVKA YPALVDEKDSVAIRLFDTPHQQQQVMRHGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFN PYGKVLDLIDDCIACAVDKLIESSGGPVWQEDAFQQLHEKVRAELNETVVDIAKQVEQIL TAVFAINKRLKGRVDMAMALALSDIKSQLSGLVFRGFVTQNGWQRLPDVLRYLHAIERRL EKLAQDVHRDRAQMLKVEQVQQAWQQWSNKLPTERRDDDDVKAVRWMLEELRVSYFAQQL GTPFPISDKRVLQAMEQVEG NT seq 3843 nt NT seq  +upstreamnt  +downstreamnt atgcttcgcgatcggcaacgtttgcgccgtcgtttgcagggcgcagcgaaggtcagcagc ccgcaggctcaggccgcgatcgctcaggaaattgagggggaaattgttgcggcgcgccag aaagtcgagaatcggcgggcaagctgcccgacaattcactaccctgagcagttgcccgtt agtcagaaaaaagacgagatactggaggcgctgcgtcatcatcaggtgattattgtcgca ggtgaaacgggttcgggtaagaccacgcagttgccgaaaatctgtctcgaactggggcgt ggcgtgcatggtctgattggccacacgcagccacgccgtctggctgcgagaaccgtcgcc gaccgtattgccgcagagttggaaacgccgctgggtggcagcgtcgggtataaagtccgt tttaacgatcaggtcggtgacaatacgctggtcaaactgatgaccgacggtatcctactg gcggaaattcagcaggatcgcctgttgatgcaatatgacacgctgatcatcgatgaagcg catgaacgcagcctgaatatcgattttatcatgggctatttgcgccaactactgccaaaa cgccctgatttaaaagtgattatcacatcggctaccatcgatccgcagcgcttctcgcgc cattttaatcatgcgccaatcattgaagtctcgggcaggacgtatccggtggatgtgcgt taccgtcccgtggtggaagacgctgatgacagcgagcgcgatcagctacaggcgattttt gatgccgttgatgaactgacacgcgaagggccgggtgacatactggtcttcatgagcggc gaacgtgaaatccgcgatacggcagaggcgttgacccgcctggatttgccgcataccgaa attttaccgctgtatgcacgtttgtcgaatcaggaacaaaaccgtgtctttcagtcacat catggtcgccgcatcgtgctggcgaccaacgtggcggaaacgtcacttaccgtgccgggc attcgctatgtgatcgatccaggtactgcgcgtatcagccgctatagcttccgcaccaag gtacaacggctaccgattgaaccggtctcgcaggcgtcggcgaatcagcgtaaagggcgc tgtggccgtgttgccgctggggtgtgtattcgcctctattccgagcaggattttctctct cgacctgaatttaccgaccctgaaattcttcgcaccaatctggcttccgtcattctgcaa atgacgtcgctggggttaggggatatcgccgcgttcccgtttgttgaagcgccagataag cgcaacattcaggacggcgtgcgcttgctggaggaactgggggcgattcatctggcggag aacgggcattaccatctaacgccacaagggcaacagttggcgcaattaccgattgaccca cgtttggcgcgtatggtgctggaagcgcgtaaaatgggctgtgtgcgtgaggtgatggta attactgccgcgctgtcgattcaggacccgcgcgaaaggccgatggataagaagcaggcg tcagatgaaaaacaccgtcgctttgccgataaagactctgattttctggccttcgtcaat ctgtgggactatctgcgtgagcagcagaaagcgctgtcttccagccagttccgccgtcag tgtcgtaccgattttcttaactacttgcgcgttcgtgaatggcaggatatctacacgcaa ctgcgtcaggtggtgaaagagttggggttaccggtcaacagcgaaccggctgattatctg agtattcactgctcgctgctcactggcttgttgtcgcatatcggacagaaagacattgag aaacaagaattcagcggtgcgcgtaacgcccggtttgctatttttccaggctccgggtta ttcaaaaaaccgcctaaatggacgatggtggctgagctggtggagaccagccgcttatgg gggcgcatcgccgcgcgcattgaacccgagtggatcgaaccgctggctccgcatctgatt aaacggagctacagcgatcctcactgggagaaagcgcagggtacggtgatggcgcaggag aaggtgacgctcttcgggctgccgattgttgcggcgcgtaaggtgaactacagctcaatc gatccgacactggcgcgagagatgttcatccgccatgcgctggtggaaggcgattggcaa acgcatcacgcttttttccgcgccaaccttaagttgctggcggaggtggaggatttagag cataaatcgcgccgccgcgacattttggtggacgatgaaacgctgtttgcgttttacgat cgacgtttgccgcatgacgttgtgtcgtcacgccattttgacaaatggtggaaaggtgcc agccgcgacaacgccgacctgcttaatttcgaaaaaagcatgttgattaaagacggtgcg gaaaaggtgagtgcgctggattacccgaatttctggcatcaggacaacttgaaattacgc ttgtcctatcagtttgagccgggcacggatgcggatggcgtaacggtacacattccgctg cctattctcaatcaggttcgggaagaaggcttcgagtggcaaattcccggcgtgcgtcgc gaactggcgattgcgctgattaaatcgttgcctaagccgttacgccgtaactttgttcct gcgccgaactatgcagaggcctttctggcgcgtaccacgcctttggagaaagggttattg gatgcgctggagcgtgaacttcggctgatgacgggcgtcacggtgccgcgtgaggcgtgg cagtgggatcaggttcccgatcatctgaaaatcacgttccgcgttattgatgagaaaaat cggacgcagcgagaaggtaaagagctgagcgcgctgaaagatcagctcaaggataaagtg caacaaacgctgtcatccgtggtggatgacgggctggagcagcgtggcctgcacgtctgg agcttcggctcgctgccggattgttatgagcagaaacgaggcggctactcggtcaaagcc taccctgcgttggtggatgaaaaagacagcgtggcgatccgcctgtttgacacaccacac cagcagcagcaggtcatgcgacacggattgcgccgtctgttgttattaaatattccttcg ccgatcaaatacctacacgaaaaactgccgaacaaggcgaaactcggcctctatttcaac ccgtatggtaaggtgttggatctcatcgatgactgtatcgcctgcgcggtagacaaactt attgaatcatccggcggcccagtctggcaggaagacgcattccagcagttgcatgaaaaa gtacgtgcagagctgaacgagacggtggtggatatcgccaaacaggttgagcaaatcttg acggcggtgttcgccatcaacaagcgtctgaaagggcgtgtagacatggcaatggcgctg gcattaagtgatatcaaaagccagttgagcggtctggtgttccgtggttttgtgacccag aacggttggcaacgtctgccggacgtgctgcgttatctgcatgcgatagaacgccgtctg gagaagctggcgcaggatgtccaccgtgacagggcgcagatgctgaaagttgaacaggtt caacaggcatggcagcagtggtcgaataagttgcctacggaacgacgtgacgatgacgac gtgaaggcagtacgctggatgctggaagagctgcgcgtcagttactttgctcaacagcta gggacaccgttcccgatctcggataagcgcgtattgcaggcgatggagcaggttgaaggg taa

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