Pectobacterium parmentieri RNS08.42.1A: A8F97_06620
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Entry
A8F97_06620 CDS
T04513
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
ppar
Pectobacterium parmentieri RNS08.42.1A
Pathway
ppar00540
Lipopolysaccharide biosynthesis
ppar01100
Metabolic pathways
ppar01250
Biosynthesis of nucleotide sugars
Module
ppar_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
A8F97_06620
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppar01005
]
A8F97_06620
Enzymes [BR:
ppar01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
A8F97_06620
Lipopolysaccharide biosynthesis proteins [BR:
ppar01005
]
Lipid A
A8F97_06620
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AOR58577
UniProt:
A0A0H3I945
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Position
1496976..1497830
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AA seq
284 aa
AA seq
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MTNKVVKIGDIPVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEAHQAQPVADVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFIEGGNDQVILCDRGSNFGYDNLVVD
MLGFNVMKQASNGAPVIFDVTHALQCRDPFGAASGGRRGQVTELARAGMAVGLAGLFIEA
HPDPANAKCDGPSALPLDKLEPFLQQIKAIDDLVKNFPELDTSK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgacgaataaagtggtcaagataggggatatccccgttgccaacgatctgccttttgta
ctgtttggcggcatgaatgttcttgaatcacgcgatctggcaatgcgcatttgtgagcat
tacgtcacggtcacgcagaagttaggtattccttacgtgttcaaggcgtcattcgataag
gctaaccgctcctcgattcactcttaccgtggtcctggtctggaagaagggatgaaaatc
tttcaggaactgaaacagacctttggcgtaaaaattattactgacgtgcatgaagcacat
caggcgcagcccgttgcggatgtggttgatgtgatccagcttcctgcgtttttagcacgc
caaaccgatctggtagaagcgatggcgaaaaccggtgcggtgatcaacgtaaaaaaaccg
cagttcgtcagcccaggtcaaatgggtaatatcgtcgataaatttatcgagggcggtaac
gatcaggtgatcctgtgtgaccgcggcagcaactttggttacgacaatctggttgttgat
atgctgggcttcaatgttatgaagcaggcttccaacggtgccccggtaatttttgacgtt
acgcatgcgctacagtgccgcgacccgtttggtgcagcatccggtggccgtcgtgggcaa
gtgaccgaactggcgcgcgctggtatggcggtaggtttggcgggactgtttattgaagct
caccccgatcctgctaacgcgaagtgtgatggcccatccgcgctgccgctggataaacta
gaaccattcctgcaacaaataaaagcgattgacgatctggttaaaaacttcccagaattg
gataccagcaaataa
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