Pseudomonas putida BIRD-1: PPUBIRD1_0645
Help
Entry
PPUBIRD1_0645 CDS
T01975
Name
(GenBank) LysR family transcriptional regulator
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
ppb
Pseudomonas putida BIRD-1
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppb03000
]
PPUBIRD1_0645
Transcription factors [BR:
ppb03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PPUBIRD1_0645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
ADR58335
LinkDB
All DBs
Position
complement(728597..729514)
Genome browser
AA seq
305 aa
AA seq
DB search
MSRRPDPLAQVSDFDIRLLKIYRSVVECGGFSAAENVLGIGRSAISQQMNDLEQRLGLRL
CQRGRAGFSLTEEGREVYHSALQLLSALESFRTEVNGLHQHLRGELNIGLTDNLVTLPHM
RITHALAELKDRGPDVRIQIRMIAPSQVEHGVLDGSLHVGVVPQTSPLSGLEYQPLYSER
SLLYCAVGHPLFYADDQQIDDQRLNSQEAITPTFRLPTDIQAHYQALNCTASASDREGMA
FLILTGRYIGYLPDHYAMFWVQQGRLRALKPKERFYDLSLSWVTRKGRRPNLVLESFLES
LAATR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagccgaagacccgatccactcgcccaagtcagcgatttcgacatccgcctgctgaag
atctatcgcagcgtcgtcgagtgcggtggcttctccgctgccgaaaacgtactgggcatt
ggtcgctcggccattagccagcagatgaacgaccttgaacaacgcctcggcctgcgcctg
tgtcagcgcggtcgcgctggtttctcgctgacggaggaaggccgtgaggtctaccattca
gccctgcaactgctcagtgcgctggaaagcttccgcaccgaggtcaacggcctgcaccag
catttgcgcggcgagctgaacatcggcctgaccgacaacctggtgacgttgccacacatg
cgtatcacccacgccctggcggaactcaaggatcggggccctgatgtgcgcatccagatc
cgcatgatcgcccccagccaggtcgagcacggcgtgctcgacggcagcctgcacgttggc
gtcgtaccacagaccagccccctatcggggcttgagtaccaaccgttgtacagcgaacgc
tcgctgctgtactgcgcggttggccatccgctgttctacgccgacgaccagcagatagac
gaccagcgcctcaacagccaggaagccatcacccccaccttccgcctgccgaccgacatc
caggcgcactaccaggcactgaattgcacagccagtgcttctgaccgcgagggcatggcg
tttctcatccttaccgggcgctatatcggctacctgcccgaccactacgccatgttctgg
gtgcagcaaggccgtttgcgtgcgctcaagcccaaggagcgtttttatgacctgagcctg
agctgggttacccgcaagggccgacgtcccaacctggtgttggaaagcttcctcgaaagc
ctggctgcgacacgttga
DBGET
integrated database retrieval system
