Pseudomonas putida BIRD-1: PPUBIRD1_3325
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Entry
PPUBIRD1_3325 CDS
T01975
Symbol
csuD
Name
(GenBank) CsuD
KO
K07347
outer membrane usher protein
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PPUBIRD1_3325 (csuD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppb02000
]
PPUBIRD1_3325 (csuD)
02044 Secretion system [BR:
ppb02044
]
PPUBIRD1_3325 (csuD)
02035 Bacterial motility proteins [BR:
ppb02035
]
PPUBIRD1_3325 (csuD)
Transporters [BR:
ppb02000
]
Other transporters
Pores ion channels [TC:
1
]
PPUBIRD1_3325 (csuD)
Secretion system [BR:
ppb02044
]
Chaperone-usher system
Type 1 pilus assembly protein
PPUBIRD1_3325 (csuD)
Bacterial motility proteins [BR:
ppb02035
]
Pilus system
Fimbrial proteins
PPUBIRD1_3325 (csuD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_C
PapC_N
Motif
Other DBs
NCBI-ProteinID:
ADR60922
LinkDB
All DBs
Position
complement(3717605..3719902)
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AA seq
765 aa
AA seq
DB search
MVSPALVLADDLPPPPTEMSAIAEATLYLDLVVNQMPRVDLIPVQQRAGRLYLDSDVLRA
AGVSLPGNPQGEVALDSIAGLHTDYDSQNQRLLLQVPPAWLPEQQVGDRNLYPASDARSS
FGALFNYDLYLNDTDEGGTYLAAWNELRLFDSWGTFSSTGQWRRSFNGAQADDTRRGFMR
YDTTWRFTDEQRLLTYEAGDFVTGALPWSSSVRVGGVQLSRDFAARPDLVTYPLPAFAGE
AAVPTSLDLFINGFKSSTTELQPGPYTLTNVPFINGAGEAVVVTTDALGRQVSTTLPFYV
TSSLLQKGLSDYSVAAGSLRRDYGVRDFSYGPGIASGSLRYGLSDIFTLETHAETAESLM
LGGLGGNMRVGNFGVLNAALAQSRFDGEKGHQVALGYQYNSQRIGFGYQRLQRHGDYADL
SRVGSAEMQLSKSSEQVTLSVNLNEYGSIGAGYFDVRAGDGTRTRLINLSYSKPLWGSSS
VYLSANREVGDSQWAVQAQLVIPFDLHGTLALSMERSNEGETLQRVNYSRAVPAGVGVGY
NLGYAAGSDRDAYRQADVTWRLQSVQLQAGVYGSSGEMTRWADASGSLVWMDAGVFAANR
IDDAFVVVSTAGYADVPVRYENQEIGRTDAKGHLLVPYSSGYYRGKYEIDPMNLPPDVLA
PDVEQRVAVRRGSGYLLEFPLKRVMAASVELVDGNQQVLKLGSRVTHAESGTQAVVGWDG
LVYLENLSLHNRLQVALEGGGHCEVAFDLPEAQGSVPLIGPLVCR
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggtcagccccgcgctggtgctggccgacgacttgcccccaccgcccacggagatgtcc
gccatcgccgaggccaccctttacctcgacctggtggtgaaccagatgcccagggttgac
ctgataccggtgcagcagcgggccgggcggttgtatctggacagcgacgtattgcgtgca
gccggcgtttcgctgccgggcaatccccagggggaggtggccctggacagcatcgcgggg
ctgcacaccgactacgacagtcagaaccagcgcctgctgctgcaagtgccgccagcctgg
ttgccagaacagcaagtgggtgatcgcaacctttacccggccagcgatgcgcgcagcagt
ttcggcgccttgttcaactacgacctgtatctcaacgacaccgatgaaggcggtacctac
ctggccgcctggaacgagctgcgcctgttcgacagctggggtaccttttccagcaccggg
cagtggcgtcggtctttcaatggcgcacaggcggacgatacccgccgtggcttcatgcgt
tacgacaccacctggcgcttcaccgacgagcagcgcctgctgacctacgaagccggtgac
ttcgtgacgggtgccttgccctggagcagttcggtgcgagtgggtggggtgcagctgtca
cgcgacttcgctgcgcgtcctgatcttgtcacttacccgttgcctgcgttcgccggtgaa
gcggcggtgccgacgtcgcttgacctgttcatcaacggtttcaagtccagtaccaccgaa
ctgcagccaggcccctacaccctgaccaatgtgccgttcatcaacggtgccggggaggcg
gtggtggtcaccactgatgcccttggccggcaggtgtcgaccaccttgccgttctatgtc
accagcagcctgctgcagaagggcctgtcggactactcggtggccgccgggagcctgcgc
cgtgattacggcgtacgtgatttcagctatggaccgggtatcgcctcgggcagcctgcgc
tatgggctcagtgacatcttcaccctggaaacccacgccgaaacggctgagtcgctgatg
ctgggtgggctgggtggcaacatgcgcgtgggcaacttcggcgtgctcaacgccgccttg
gcgcaaagccggttcgatggcgaaaaggggcaccaggtcgcccttggctaccagtacaac
agccagcgcatcggcttcggttaccagcgcctgcaacgccacggcgactatgccgacctg
agccgggtgggctctgcggagatgcaactgagcaaaagcagcgaacaggtcaccctcagt
gtcaaccttaacgagtacggcagcattggcgctggctacttcgacgtgcgcgccggtgac
ggtacgcgtacccggttgatcaacctgagctacagcaagccgctgtggggcagcagcagt
gtgtacctgtcggccaaccgtgaagtgggtgacagccagtgggcggtgcaggcgcaactg
gtgatcccgttcgacttgcacggcaccttggcgctgagcatggaacgcagcaatgaaggc
gagaccctgcaacgggtcaactacagccgtgcggtgccagcgggtgtcggcgtcggttac
aaccttgggtatgccgcaggcagcgaccgtgatgcctatcgccaggccgacgtcacctgg
cgcctgcaatcggtgcaattgcaggccggtgtgtatggcagcagcggcgagatgacccgc
tgggccgacgccagtggttctctggtgtggatggatgccggcgtgttcgccgccaaccgt
atcgatgatgccttcgtggtggtcagcaccgcaggttacgcggatgtgccggtgcgttat
gaaaaccaggaaatcggccgtaccgatgccaaggggcacttgctggtgccttacagcagc
ggttactaccggggtaagtacgagatcgatcccatgaacctaccaccggatgtcctcgcg
ccggacgttgagcagcgtgtggcggtacgacggggcagtggctacttgctggaattcccc
ctcaagcgcgtcatggcggccagtgttgaattggtggatggcaatcagcaggtgctcaaa
ctgggtagccgtgttacccacgcagagagtggcacccaggcggtggtgggatgggacggg
ctggtatacctggagaacctgtcgttgcataaccgccttcaggtggcgcttgaagggggt
gggcattgcgaagtggcgttcgacctgcccgaagcgcaaggctcggtccctttgattggt
ccgttggtgtgccgatga
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