Pseudomonas putida BIRD-1: PPUBIRD1_4004
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Entry
PPUBIRD1_4004 CDS
T01975
Symbol
kdsA_2
Name
(GenBank) KdsA_2
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb00540
Lipopolysaccharide biosynthesis
ppb01100
Metabolic pathways
ppb01250
Biosynthesis of nucleotide sugars
Module
ppb_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PPUBIRD1_4004 (kdsA_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppb01005
]
PPUBIRD1_4004 (kdsA_2)
Enzymes [BR:
ppb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
PPUBIRD1_4004 (kdsA_2)
Lipopolysaccharide biosynthesis proteins [BR:
ppb01005
]
Lipid A
PPUBIRD1_4004 (kdsA_2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
POLQ_helical
Motif
Other DBs
NCBI-ProteinID:
ADR61587
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Position
complement(4478249..4479094)
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AA seq
281 aa
AA seq
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MTQKIIRVGNIEIANDKPFVLFGGMNVLESRDLAMKVCEEYVRVTEKLGIPYVFKASFDK
ANRSSVTSYRGPGMEEGLKIFEEIKRTFNVPVITDVHEPYQAEPVAKVCDIIQLPAFLSR
QTDLVVAMAKTGVVINIKKAQFLAPQEMKHILAKCEEAGNDQLILCERGSSFGYNNLVVD
MLGFGIMKQFEYPVFFDVTHALQMPGGRADSAGGRRAQVTDLAKAGMSQGLAGLFLEAHP
DPDNAKCDGPCALRLDKLEPFLVQLKQLDDLVKSFPTVETA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgacccagaagatcattcgcgtcggtaacatcgagatcgccaacgacaagccgttcgtc
ctgttcggcggcatgaacgttctggaatcccgtgacctggcgatgaaggtctgcgaagag
tacgtgcgggttaccgagaagctcggtatcccgtacgtgttcaaggccagcttcgacaag
gccaaccgttcgtcggtaacgtcctaccgtggccctggcatggaagaggggctgaagatc
ttcgaagagatcaagcgcaccttcaacgtgccggtgatcaccgacgtgcacgagccttac
caggccgagcccgtcgccaaggtatgcgacatcatccagctgccggctttcctgtcgcgg
cagactgatctggtggtggccatggccaagaccggcgtggtgatcaacatcaagaaggct
cagttcctcgcacctcaggaaatgaaacacatcctggccaagtgcgaagaggccggtaac
gaccagttgatactctgcgaacgtggttcgagcttcggctacaacaacctggtggtcgac
atgctgggcttcggcatcatgaagcagttcgagtacccggtgttcttcgacgtgacccac
gccctgcagatgccgggtggccgcgccgattccgccggcggccgtcgagcccaggtcact
gacctggccaaggccggcatgagtcagggcctggccgggcttttcctcgaagcccacccc
gacccggacaacgccaagtgcgacggcccatgcgccctgcgcctggataaactggagccg
ttcctggtccagctcaagcaattggacgacctggtgaaaagttttccgacggtagaaacc
gcgtaa
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