Pseudomonas putida BIRD-1: PPUBIRD1_4144
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Entry
PPUBIRD1_4144 CDS
T01975
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PPUBIRD1_4144 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppb03400
]
PPUBIRD1_4144 (ung)
Enzymes [BR:
ppb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PPUBIRD1_4144 (ung)
DNA repair and recombination proteins [BR:
ppb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PPUBIRD1_4144 (ung)
Prokaryotic type
PPUBIRD1_4144 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADR61725
LinkDB
All DBs
Position
complement(4630267..4630959)
Genome browser
AA seq
230 aa
AA seq
DB search
MTDDDRIKLEPSWKAALRGEFDQPYMHQLREFLRGEYAAGKEIYPPGPLIFNALNSTPLG
QVKVVILGQDPYHGPGQAHGLCFSVQPGVATPPSLVNIYKELQRDLNIPIPSHGYLQSWA
EQGVLLLNTTMTVERANAASHAKKGWELFTDRIIQVVSEQCPNVVFLLWGAHAQSKQKLI
DGTKHLVLKSVHPSPLSAYRGFIGCGHFSRANSFLEQRGLGPIDWTLPPL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgacgatcgcatcaaactcgaacccagctggaaggccgcattgcgcggtgaa
ttcgaccagccttacatgcaccagctgcgcgagttcctgcgtggcgagtacgctgccggc
aaggagatctacccgccagggccgctgatcttcaatgcgctcaattcgacaccgctgggc
caggtgaaggtggtcatcctcggtcaggacccgtaccacgggccgggccaggcacatggc
ttgtgcttctcggtgcaaccgggcgtggccacgccgccgtcgctggtcaatatctacaag
gagctgcagcgcgacctgaacatcccgatccccagccacggctacctccaaagctgggca
gaacaaggcgttctgttgctcaacacgaccatgaccgtcgagcgcgccaatgccgcgtcg
catgccaagaaaggctgggaattgtttaccgacaggattatccaggtggtcagtgagcaa
tgcccgaacgtggtattcctgctatggggggcgcatgcacagagcaagcagaagctgatc
gacggtaccaagcatctggttttgaagtcggtccatccttcgccgctgtcggcgtatcgc
gggttcatcggttgcgggcatttcagccgtgccaacagcttcctcgagcagcgggggctc
gggcccatcgactggacactgcccccgctgtga
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