Pseudopropionibacterium propionicum: HMPREF9154_1051
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Entry
HMPREF9154_1051 CDS
T02180
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ppc
Pseudopropionibacterium propionicum
Brite
KEGG Orthology (KO) [BR:
ppc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppc03019
]
HMPREF9154_1051 (orn)
03009 Ribosome biogenesis [BR:
ppc03009
]
HMPREF9154_1051 (orn)
Messenger RNA biogenesis [BR:
ppc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HMPREF9154_1051 (orn)
Ribosome biogenesis [BR:
ppc03009
]
Eukaryotic type
Pre-60S particles
RNases
HMPREF9154_1051 (orn)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AFN47056
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All DBs
Position
complement(1172864..1173499)
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AA seq
211 aa
AA seq
DB search
MSDELVWIDCEMTGLDLERDALIEVATLVTDKDLNVLGEGVDVLIKPTDEQLAGMSDFVR
EMHTKSGLLDALAGGTTMEEATRTVLDYVREFVPTARKAPLAGNTIGTDRAFLARDMPEL
EAHVHYRNVDVSSLKELARRWFPRVLYQAPAKQGNHRALADIQESIEELRYYREAMFVAP
PGPTTNQAKQIAARHRGSLTGLAAPEVESVQ
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatgaactggtgtggattgactgcgagatgaccgggctggatctggagcgcgac
gcgctgatagaggtggcgacgctcgtcacggacaaggacctgaacgtgctgggcgagggc
gtcgacgtgttgatcaaacccaccgacgagcagctggccggaatgagcgacttcgttcgc
gagatgcacaccaaatcgggactgctggacgccctggccggcgggaccacgatggaagag
gccacccggacggtcctcgactacgtccgggagttcgtgcccaccgcccgcaaagccccc
ctggcgggcaacaccatcgggacggatcgtgcgttcctggcccgggacatgcccgagctg
gaggcccacgtccactaccgcaacgtggacgtctcctccctgaaagagctggcgcggcgc
tggttcccgcgggtgctgtaccaggcccccgccaagcagggaaaccaccgggcgctggcc
gacatccaggaatccatcgaggagctgcgctactaccgcgaagcgatgttcgtcgcccct
ccaggccccaccacgaaccaggccaagcaaatcgcggcccgccaccgcggcagcctgacg
gggctggccgccccggaggtcgagtccgttcagtag
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