KEGG   Pseudopropionibacterium propionicum: HMPREF9154_1051
Entry
HMPREF9154_1051   CDS       T02180                                 
Symbol
orn
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
ppc  Pseudopropionibacterium propionicum
Brite
KEGG Orthology (KO) [BR:ppc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppc03019]
    HMPREF9154_1051 (orn)
   03009 Ribosome biogenesis [BR:ppc03009]
    HMPREF9154_1051 (orn)
Messenger RNA biogenesis [BR:ppc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HMPREF9154_1051 (orn)
Ribosome biogenesis [BR:ppc03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    HMPREF9154_1051 (orn)
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: AFN47056
LinkDB
Position
complement(1172864..1173499)
AA seq 211 aa
MSDELVWIDCEMTGLDLERDALIEVATLVTDKDLNVLGEGVDVLIKPTDEQLAGMSDFVR
EMHTKSGLLDALAGGTTMEEATRTVLDYVREFVPTARKAPLAGNTIGTDRAFLARDMPEL
EAHVHYRNVDVSSLKELARRWFPRVLYQAPAKQGNHRALADIQESIEELRYYREAMFVAP
PGPTTNQAKQIAARHRGSLTGLAAPEVESVQ
NT seq 636 nt   +upstreamnt  +downstreamnt
gtgagcgatgaactggtgtggattgactgcgagatgaccgggctggatctggagcgcgac
gcgctgatagaggtggcgacgctcgtcacggacaaggacctgaacgtgctgggcgagggc
gtcgacgtgttgatcaaacccaccgacgagcagctggccggaatgagcgacttcgttcgc
gagatgcacaccaaatcgggactgctggacgccctggccggcgggaccacgatggaagag
gccacccggacggtcctcgactacgtccgggagttcgtgcccaccgcccgcaaagccccc
ctggcgggcaacaccatcgggacggatcgtgcgttcctggcccgggacatgcccgagctg
gaggcccacgtccactaccgcaacgtggacgtctcctccctgaaagagctggcgcggcgc
tggttcccgcgggtgctgtaccaggcccccgccaagcagggaaaccaccgggcgctggcc
gacatccaggaatccatcgaggagctgcgctactaccgcgaagcgatgttcgtcgcccct
ccaggccccaccacgaaccaggccaagcaaatcgcggcccgccaccgcggcagcctgacg
gggctggccgccccggaggtcgagtccgttcagtag

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