Pseudopropionibacterium propionicum: HMPREF9154_1339
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Entry
HMPREF9154_1339 CDS
T02180
Name
(GenBank) type III restriction enzyme, res subunit
Organism
ppc
Pseudopropionibacterium propionicum
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Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
SWI2_SNF2
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AFN46100
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Position
1466630..1469188
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AA seq
852 aa
AA seq
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MPLRLHQREALDAWRRSISAGVSRGWIVLPPGAGKTMVGVRAIRESGRTGVIFSPNIAIR
GQWQAAVPEVRCLTYQALANFGDDSGGSTQLARLHPNGRALVAELAATENLMIVLDECHH
LLRTWGRLLAEVLGLLPDAVVLGLTATPATALTGAEATLENELFGEITYSANIPQVVAAG
DLVPYQELGWLTSPTAAERDWLGEQQVRVQELLTHLSAPDRASVPLFEAVAKLQANVSWE
ELAATDERLTDALLRLAHAGYAEPPIGVAFGERHRRDPGIEDWVAVLNQWLLPLVDSPDP
RDHALILEVREVLPSIGYRWTRRGISAAASTMDRVLARSASKALAAAEIVALEEENLGAD
LRALVVCDFERAAALPHGLRDVVTADSGSAWQTLKALAENPVGQRLEPLLVTAGVVAGTP
SSSRALMDFAADRLPGHSLDTAEEEGLVRVLGWNVRQWVPVVTDFFQMGGTRLLIGTRGL
LGEGWDAPGVNCLVDLTSATTPGAVVQLRGRSLRRDPENPAKVAINWSVACVADGVMGDA
DWRRLVRKHRGYLAPDEQGDLVDGVAHLADEFSEFRTPESDGIEAANVLAARRSRERDRV
TEQWNDPRIRTGREVSVVRVSSRAKEPLTGSGFGDAAPRRLGPVLWPWALGAALVLAVLG
LSWWAAAALVLTGVDLLIRVIRAGRRLTGLAANVGVGRVAKAVADALQARGLVSAGAGAV
AVEIRGQELRCRLSGVPAEESAGFAEALDEALQPVSRPRYLISRLTADPPRLRDVLRLGL
IGRETVLETWHPVPSVLASNRDRADAYLLAWRRWVGEGEVRYARSPEGEGITRAVRDIDP
WRLTSAIRLHWE
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgcccttgaggttgcaccagcgggaggctctcgacgcctggcgtcggagcatctcggct
ggggtttccaggggttggatcgtcctgccaccgggcgccggcaagaccatggtcggtgtg
cgggcgatccgcgagtcggggcgcaccggtgtgattttcagtccgaacatcgccattcgt
ggccagtggcaggccgctgtgccggaggttcgctgcctgacctatcaggcgctcgccaat
ttcggggacgactccggtgggagcacgcagctggctcgtctgcacccgaacggaagagcc
ttggtggccgagcttgcagccactgagaacctgatgatcgtcctggacgaatgccatcac
ttgctccggacgtggggccggctgctggccgaggtgcttggactgttgcccgacgccgtc
gtactgggtctcacggccactccggcaaccgctctgaccggagcggaggccaccctggag
aacgaactcttcggcgagatcacgtattccgcgaacattccccaagtggtggcggccggt
gacctggtcccttatcaggaactcggctggctgacgagccccaccgccgctgaacgcgac
tggctgggagagcaacaggtgcgggtccaggaactgctcacccatctcagtgccccggac
agggcgagcgttccactcttcgaggcggtggcgaagctgcaggccaacgtctcctgggag
gaactcgcggccacggatgaacgcctgaccgatgccctgctgcgcctcgcccacgcgggt
tacgccgaaccacccatcggagttgcgttcggcgagcgccaccgacgcgatcccgggatc
gaagactgggtggcggtactgaaccagtggctccttccgttggtcgacagccccgacccg
cgggaccacgccctgatcctggaggtccgggaggttcttccctccatcggttaccgctgg
acccggcgaggcatcagcgcggccgcctccaccatggaccgggtactggcccgcagcgca
tccaaggccctcgccgcggccgagatagtggctctggaggaggagaacctcggcgctgac
ctgcgcgccctggtggtgtgcgatttcgagcgggcggccgcgctgccacacggtctgcgc
gacgtggtgaccgcggattcgggatcggcctggcagaccctgaaggccttggccgagaac
ccggtcgggcagcgcctcgaaccgttgctcgtcaccgctggggtcgtcgcgggaaccccg
tcgagctcccgggcgctgatggacttcgccgcggatcggcttcccgggcactccttggat
accgcggaggaggaggggttggtgcgggttctcggctggaatgtccgccagtgggtgccg
gtggttaccgatttcttccagatgggtggcaccaggctcctgataggcacccgtgggctg
ctgggggagggatgggacgccccgggcgtcaactgcctggtggacctgaccagcgcaacc
acgcccggtgccgtggttcagcttcgcgggcgcagcctacgacgcgatccggagaatccg
gctaaggtcgcgatcaactggtcggtggcctgcgtcgccgacggggtgatgggggacgcg
gattggcgtcgtctcgtgcgcaagcaccgtggttatctcgccccggacgagcagggcgat
ctggtggacggggtggcgcacctggccgatgagttcagcgagttccggactccggaatcg
gacgggatcgaggccgccaacgttcttgcggcccggcgttcccgggaacgcgaccgggtt
acggagcaatggaacgacccgcggatcaggaccggccgggaggtgtcggtggtgcgggtg
agttccagggcgaaggaaccgttgaccggaagcggcttcggggatgcggcgccccggagg
ctggggcccgtgctgtggccctgggcgctgggcgcagccctggtgctggcggtgctgggg
ctgtcctggtgggcggccgccgcactggtgttgacgggagtggatctgctgatccgggtg
atccgggcgggtcgcaggctcaccgggctggcggcgaacgtcggtgtcggcagggtggcc
aaggcggttgccgacgccctccaggcgcgcgggctggtcagtgcaggagccggggcggtc
gcggtggagatcagaggacaggaactgcgctgccggctgtccggggtgcccgcggaggaa
tcggccggatttgcggaggcgctggacgaagcgttgcaacccgtttcccgaccccgatac
ctgatctcccgtctcaccgccgacccgccccggctccgggacgtgttgagactcggcctg
atcgggcgggaaaccgttctggaaacctggcatccggtcccgagcgtgctcgcctccaac
agggaccgggccgacgcctatctgctcgcctggcggcgatgggtgggggagggggaagtc
cggtacgcccgcagccccgagggtgagggcatcacgcgagcggtgcgcgacatcgacccg
tggcggctcacctcggcgattcgtctgcactgggaatga
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