Pseudopropionibacterium propionicum: HMPREF9154_1517
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Entry
HMPREF9154_1517 CDS
T02180
Name
(GenBank) putative DEAD-box ATP-dependent RNA helicase CshA
Organism
ppc
Pseudopropionibacterium propionicum
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Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
AAA_19
CMS1
UTP25
AAA_30
P-loop_SecA
UvrA_inter
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFN45656
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Position
complement(1650240..1651379)
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AA seq
379 aa
AA seq
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MARDLELAGSRLHTRVLTIYGGTGYDEQLSALKKGIDVAVGTPGRLLDLANRRALDLSHI
EVLVLDEADEMLDLGFLPDIEKLLAKTPPSRQSLLFSATMPAPILALARATLNRPVNIRA
EGADAQATVPDITQFVYQAHDLDKPEVVARIAQARDASKVMVFCRTKRAAQRLADELQER
GFPATAIHGDLNQIARERSLKKFRAGTVTILVATDVAARGIDITGVSHVINYECPDTDAT
YVHRIGRTGRAGHTGVAVTLVDWPDVTRWKVINKTLGLDFETPVETYSSSPHLYTDLDIP
EGTRGRLPRSAHPPREARSRRETTSEGGTRRRRRRRSPTTPQGDRPSSTGGSEESTAPRR
RRRRRRAGVDVTESRRNAE
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcgggatctcgaactggccggttcccggcttcacacccgggtgttgaccatctac
ggcggcaccggatacgacgagcagctgtccgccctcaagaaaggcatcgacgtggcagtc
gggacccccgggcggcttctcgacctagccaaccgccgtgcgctggacctgagccacatc
gaggtgttggtgctggacgaggccgacgaaatgctggacctcggtttcctgcccgacatc
gagaaactgctggcgaaaacacccccgtcgcgtcaaagcctcctgttctcggcgacgatg
ccggcccccatcctcgccctggcccgtgccaccctgaaccggcccgtgaacattcgcgcc
gagggcgcggatgcccaggcgacggtgcccgacatcacccagttcgtgtaccaggcccac
gacctggacaaacccgaggtggtcgcccgcatcgcccaggcccgcgatgccagcaaggtg
atggttttctgccgaacgaaacgggccgcgcagcgcttggcggatgaactgcaggagcgc
ggtttccccgccacggccatccacggcgatctgaaccagatcgccagagaacgttccctg
aagaagttcagggccgggaccgtgaccatcctggtggcaaccgacgtcgccgcccgggga
atcgacatcaccggcgtcagccacgtgatcaactacgagtgccccgacaccgacgccacc
tacgtgcaccgcatcggccggacgggccgcgcgggacacaccggcgtcgccgtcaccctc
gtcgactggccggacgtgacccgctggaaagtaatcaacaagaccctcggtctggacttc
gaaacccccgtggagacctactcctcgtccccgcacctgtacacggacctggacatcccc
gagggcaccaggggccggctcccccgctccgcgcacccgccgcgcgaagcccgttcccgc
agggagaccacatccgagggcggcacgcggcgtcgcaggcgccgacgctcccccaccaca
ccccagggggatcgcccgtcttccaccggcggctcggaggagagcaccgctccccgccgc
aggaggcgtcggcgccgcgccggggtggacgtgaccgagtcccgcagaaacgccgagtaa
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