Pediococcus pentosaceus ATCC 25745: PEPE_0004
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Entry
PEPE_0004 CDS
T00409
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
ppe
Pediococcus pentosaceus ATCC 25745
Pathway
ppe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PEPE_0004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppe03400
]
PEPE_0004
DNA repair and recombination proteins [BR:
ppe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PEPE_0004
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
DUF2813
AAA_27
DUF4355
AAA_29
DUF6649
Motif
Other DBs
NCBI-ProteinID:
ABJ67115
UniProt:
Q03I57
LinkDB
All DBs
Position
3155..4279
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AA seq
374 aa
AA seq
DB search
MYLKTLELHNFRNYADLVVEFGSGINVLLGENAQGKTNLLESIYFLALTRSHRTNSDRDL
ISWKTKAARVSGSVQKEHTVTPLEINLSSKGKNAKVNHLEQSRLSQYVGQLNVILFAPED
LSIVKGSPAVRRKFIDMEFGQMSSKYLYNSAQYRSVLKQRNQYIKQLQFNPKGDQVYLDV
LSDQLAAHGAEIIFQRIQFLKKLEKWSQEVHKEISQGKEKLSFQYVSPISSDQADTTEKI
YAALQALFQKQREKELQQGKTLVGPHLDDVRFMVNDKNVSTFGSQGQQRTTALSVKLAEI
DLMKEETGEYPVLLLDDVLSELDDSRQTHLLTAIQNKVQTFITTTSLSGVAQQLINEPHV
FNIDHGVLMQSKEE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgaagacactggagttacataattttcgtaattatgctgatcttgttgtcgag
ttcggttcgggtatcaatgttctattgggtgaaaatgcacaaggcaagactaatctatta
gaatctatttatttcttagctttgactagaagtcaccgaaccaatagtgatcgagatttg
attagttggaaaaccaaagcagcgcgagtatcagggagtgtccaaaaagaacacaccgtt
acaccgcttgaaatcaatttatcttccaaagggaaaaatgccaaagtaaatcaccttgag
caaagccgtttatcgcaatatgtcggccagcttaatgtgattttgtttgcgcctgaggat
ttatcaattgtaaaaggatctccagcagttcgccgtaagttcattgatatggaatttgga
cagatgagttcgaaatatctatataactcggcgcaatatcgatccgttctgaaacagcga
aaccagtacattaaacagctacagttcaatcctaagggtgaccaagtttatttagatgtt
ttaagtgatcagctagcagcccatggagctgaaatcattttccaacgcattcaattcttg
aagaagttggaaaaatggtcccaagaggtgcataaggaaatctcgcagggaaaagaaaaa
ttatcttttcaatatgtttcgccgatcagtagtgatcaagccgatactactgaaaaaatc
tatgcagcactacaagcccttttccaaaagcaacgtgaaaaggagcttcaacaaggtaaa
actttagtggggccacatcttgacgatgtacgatttatggttaatgacaaaaacgtatcg
acgtttggttcacaggggcaacaacgaaccacggccctgagtgttaaattagcagaaatt
gatttgatgaaagaagaaaccggagaatatccggttcttttacttgatgatgtgttatct
gaacttgacgatagtcgtcaaacacacctgttaactgccattcaaaacaaagtacaaact
ttcatcacgaccaccagccttagtggtgttgcgcaacaattaattaatgaaccccatgtc
tttaatattgatcacggagttttaatgcagagcaaggaggaataa
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