Pediococcus pentosaceus ATCC 25745: PEPE_1135
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Entry
PEPE_1135 CDS
T00409
Definition
(GenBank) Excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
ppe
Pediococcus pentosaceus ATCC 25745
Pathway
ppe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PEPE_1135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppe03400
]
PEPE_1135
DNA repair and recombination proteins [BR:
ppe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PEPE_1135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_HhH_N
GIY-YIG
UVR
HHH_5
HHH_2
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ABJ68189
UniProt:
Q03F33
LinkDB
All DBs
Position
complement(1134348..1136132)
Genome map
AA seq
594 aa
AA seq
DB search
MASEHIEHKLALLPDKPGCYQMKNLNSQIIYVGKAKNLKNRVRSYFKSSHEGKTAKLVSE
IADFDYIVTSSDKEAFLLEITLIQKFQPYYNIKLKKGTGYPYIKITNEKDPRMEIVSSVR
RDGGFYFGPYPNVYAAEETLHFLEKVYPLRRCNGFQGRPCLYYHMGQCLGACFQEVPKEE
YDQQIAKIKSFLRGNVAKIKQSLQTKMQKASEAMEFERAADIRDQIHYIEVTVEKQKIIS
NDSTPRDLFNFYLDKGWLSIQIFFIRQSRLIKREKRLFPIATDVNDELSSFILQFYNNKN
KVLPNEILVPSGLDNKIMAEILGVPVRTPQRGEKKNLLELAKENAQITLEEKFRLMELDE
SKTTGAMKEITDALGIPEGHRIEAFDHSHIQGSELVSAMVVFTDGKPDKKMYRKFKLNTV
DHADEAASTREVIRRRYVRLLKEKQSLPDLILMDGGDIQLNAAKDVLVNELSLHIPVAGM
VKNDKHKTSDLIFGSQDQRVQLDPKSQGFYLVQRIQDEVHRFAITFHRQLHAKNSLASQL
DLIQGVGPKTRNKLLKSFGSLNKIRDANLKEIEELGIPEKVAKTIKVSLSVHGK
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
ttggcatcagaacacattgaacataagttggcattgttaccagataaaccaggctgttac
cagatgaaaaatcttaatagccaaatcatttacgttggaaaagccaaaaacttgaaaaac
cgtgttcgctcttactttaaaagtagccatgagggaaaaacggcgaaactagtgagtgaa
atagccgattttgactatattgttacctctagcgataaagaagcttttttactagaaatt
actttaattcaaaagttccaaccttattacaatataaaattgaaaaaagggactggctat
ccttatattaaaattacgaatgaaaaagatccacgaatggaaattgtttcaagtgttcgt
cgagatgggggcttttactttggaccttatccaaacgtgtatgctgctgaagaaacactc
cattttttggaaaaggtttatccactacgccgatgcaatggatttcagggtcgcccctgc
ttgtactatcatatggggcaatgcttgggagcctgtttccaagaggtacccaaagaagaa
tacgaccaacaaatcgctaaaattaaatcatttttacgaggaaatgtcgcaaagattaag
cagtcccttcaaacaaaaatgcaaaaagcttctgaagcaatggaatttgaacgggcagcc
gacatacgagatcaaattcattatattgaagtaacggttgagaagcagaagattatttca
aatgatagcacgccacgtgatttgtttaatttctaccttgataaggggtggctttctatt
caaatcttctttatccggcaatcacgcttgattaaacgagagaagaggctatttccaatc
gcaacagatgtaaatgatgagctttcgtcttttattcttcaattttataataataaaaat
aaggttttaccaaatgaaattttagtaccaagtggcttagataataagattatggccgaa
attttaggtgtcccggttcgcactccacagcgtggggaaaagaaaaacttgttagagtta
gctaaagaaaatgcacaaattacccttgaggaaaagttccgattaatggagttagatgaa
agtaaaacaacaggcgcaatgaaggaaattactgatgcgcttggaatccctgaaggtcat
cgaattgaagcctttgaccattctcatattcaaggctctgaattagtttcagcaatggtt
gtttttacggatggaaaaccagataaaaagatgtatcgcaaatttaagctaaatacagtc
gatcatgctgatgaagctgccagtacgagagaggtaattcgtcgccgatatgttagacta
ttaaaagagaaacaatctttgcctgatttgattttaatggacggtggcgatattcagctt
aatgcagcaaaggatgttttggtaaatgaattaagtttgcatattccagttgctgggatg
gttaaaaatgataaacataaaacttcggatttgatttttggtagccaagaccaacgagta
cagttggatcctaaaagtcagggcttttatttagttcaaagaatccaagatgaagtgcat
cgttttgcgattactttccatcgtcagttgcacgccaaaaattcgttggcttcccaatta
gatttaattcaaggtgttggacctaaaacgcggaacaagctgttgaagtcgtttggttca
ttgaataaaattagggatgctaatttgaaagaaattgaagaactcggaattccagaaaaa
gtagctaaaactatcaaagtgtccttatcagtgcacggaaaatag
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integrated database retrieval system
