Pediococcus pentosaceus ATCC 25745: PEPE_1482
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Entry
PEPE_1482 CDS
T00409
Name
(GenBank) DNA replication and repair protein RecR
KO
K06187
recombination protein RecR
Organism
ppe
Pediococcus pentosaceus ATCC 25745
Pathway
ppe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PEPE_1482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppe03400
]
PEPE_1482
DNA repair and recombination proteins [BR:
ppe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PEPE_1482
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PEPE_1482
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_ZnF
RecR_C
NapD
HHH
HHH_8
CdhD
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
ABJ68513
UniProt:
Q03E59
LinkDB
All DBs
Position
complement(1453243..1453842)
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AA seq
199 aa
AA seq
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MQYPEPIAKLIDSFMKLPGIGYKTATRLAFFTLDMEKDDVTEFAKALISAQRDLSFCSIC
GNITEDDPCDICQDPSRDQKAVLVVEDSKDVMSMEQMKEYHGLYHVLHGVLSPMDGKGPE
DINIAALLTRLQKNEAIKEVIIATNATPEGEATAMYISRLVKPSGIKVTRLAHGLSVGSD
IEYADQMTLYKAVEGRTEM
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatccagaaccgattgcgaaattaatcgatagtttcatgaaattaccaggtatt
ggttataaaacggcaacccgattagcattttttacgttagatatggaaaaagatgatgta
accgaatttgctaaggcgctgatttcagcacaacgggacctaagtttctgtagtatttgt
ggaaatattacggaagatgatccatgtgatatttgtcaggacccttcacgagatcaaaaa
gcggttttagtagtcgaagattctaaggacgtaatgtcaatggaacagatgaaagaatac
catggcttgtatcatgtgttacatggcgtgttatcacccatggatggtaaaggccctgaa
gacatcaatattgctgcgttacttacccgtttacagaagaacgaggccattaaagaagtt
attattgctacaaatgcaactccagaaggggaagcgacagcgatgtatatttcaagattg
gttaaaccgtccggcattaaagttactcgtttagctcacgggttatcggtcggaagtgat
attgaatatgcggatcaaatgactttatataaagcggttgaaggccgaacagaaatgtaa
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