Prunus persica (peach): 18782231
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Entry
18782231 CDS
T03092
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pper
Prunus persica (peach)
Pathway
pper03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
18782231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pper03400
]
18782231
Enzymes [BR:
pper01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
18782231
DNA repair and recombination proteins [BR:
pper03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
18782231
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GFIT
Motif
Pfam:
Exo_endo_phos
SAP
Exo_endo_phos_2
Prosystemin
Motif
Other DBs
NCBI-GeneID:
18782231
NCBI-ProteinID:
XP_020423430
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Position
G7:8706961..8713759
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AA seq
587 aa
AA seq
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MQYLKFKNQICQRGFLFCFFERSHRGYTSDILTGRTCFHCIGGSYFSSSYPKNEKKQNQK
VAPRNLRTGALASLTRLRATQGVPRRPVSAKTTKPMFEENKKDKTFKESMGTNPSPHKPI
VKDDGAESDVVEIESFKNDPARIEAMTVQQLRTTLRNAGVSAKGRKFELVAALKCFLEKK
KDGEGSLVIEEQVASTCVENASEKTEAETSSDGDQVQNVPVSEVGELQRYKRRLNHSSVK
SETVIGYSKVATKKEKLSIESEDLSVHKLSRTRKKTSSETINFEVKTDDKVAEPWTVLAH
KKPQKDWVPYNPRTMKLPPLAKDTKFLKLMSWNVNGLRALLKLEGFSALQLAQREDFDVL
CLQETKLQEKDVEDMKRSLIDGYGNSFWTCSVSKLGYSGTAIISRIKPLSVRYGIGISDH
DSEGRIITAEFDSFYLITGYVPNSGDGLRRLSYRINEWDPSLSNYMKELEKSKPVILTGD
LNCAHQEIDIYNPAGNKRSAGFTDEERQSFGSNFLSRGFVDTFRRQHPGVVGYTYWGYRH
GGRKFNRGWRLDYFLVSESISDKVHDSYILPDITGSDHCPIGLVLKL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcaatacctaaaatttaagaatcagatttgccagaggggttttttgttttgttttttt
gaacggagccacagaggttatacttctgatatcttaaccggccgcacgtgttttcactgc
attggagggtcatatttttcatcctcgtacccgaaaaatgaaaagaaacaaaaccaaaaa
gtagctccaaggaatttgagaactggagcattggcttctcttactagattacgagcaact
caaggagtgcctagaagacctgtttccgctaaaacaacaaagcccatgtttgaggaaaat
aaaaaggataagacattcaaagaatcaatgggtacaaacccaagccctcataaacctatt
gtcaaggatgatggtgctgaaagcgatgtggttgagattgagagttttaagaatgaccct
gcgagaatcgaggcaatgacagttcaacaactcagaacaacactgagaaatgctggggtt
tctgccaaaggccgtaaatttgaacttgtggctgccttgaagtgctttttggaaaagaag
aaagatggtgaaggttccctggtaatagaagaacaagtagcctccacttgtgttgaaaat
gcatcagagaaaactgaggctgaaacatcatctgatggagaccaagttcagaatgtccct
gtttcggaggttggtgaacttcaacgttacaagagaaggttaaaccattcgtcagttaag
agtgaaactgtgataggctatagcaaggttgcaacgaaaaaggagaagttgtcaattgaa
tcagaagacctttcagttcacaagctctcgaggacaagaaagaaaacatcttcagaaact
attaattttgaagtcaaaactgatgataaagtagctgagccatggacagttcttgcacat
aagaaacctcagaaagattgggttccttataatcctagaaccatgaaacttccaccgctt
gctaaggatactaaatttttgaagcttatgtcttggaatgtcaatggtttaagggcatta
ttgaagttagagggattctctgctttgcagctagcccaaagggaagattttgatgtactg
tgtctgcaggagaccaaactgcaggagaaggatgttgaagatatgaaaaggtctctgata
gatgggtatgggaatagcttctggacatgtagtgtttccaagcttggttattcaggaact
gcaattatttcaaggataaagccactttcagtcagatatggcattggcatatcagatcat
gatagtgaggggcggattataacagcagagtttgattcattttatctgataactggatat
gttcctaattctggagatggtttgagaagactgtcatacaggattaatgaatgggatcca
tctctcagcaattacatgaaagagctggaaaagtcaaaacctgtcattttaacaggtgat
ctgaattgtgctcatcaagagatagatatttataacccagctggaaacaaaagaagtgct
gggtttacagatgaagaaaggcaatcctttggttcaaactttttatccaggggatttgtg
gatacctttagaaggcaacaccctggtgttgttggctatacttactggggttatcgacat
ggtggacgcaaatttaatagaggctggcggcttgactacttcctcgtctcggaatccata
tctgacaaggttcatgactcgtacattctgccggatataactggcagcgatcattgtcct
ataggccttgtacttaagctgtag
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