Pseudomonas putida F1: Pput_4518
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Entry
Pput_4518 CDS
T00537
Name
(GenBank) protocatechuate 3,4-dioxygenase, beta subunit
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
ppf
Pseudomonas putida F1
Pathway
ppf00362
Benzoate degradation
ppf00624
Polycyclic aromatic hydrocarbon degradation
ppf01100
Metabolic pathways
ppf01120
Microbial metabolism in diverse environments
ppf01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Pput_4518
00624 Polycyclic aromatic hydrocarbon degradation
Pput_4518
Enzymes [BR:
ppf01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
Pput_4518
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GFIT
Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
DUF4198
GAD-like
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
ABQ80638
UniProt:
A5W928
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Position
complement(5043899..5044618)
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AA seq
239 aa
AA seq
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MPAQDNSRFVIRDRNWHPKALTPDYKTSVARSPRQALVSIPQSISETTGPDFSHLGFGAH
DHDLLLNFNNGGLPIGERIIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPL
DPNFGGVGRCLTDRDGYYSFRTIKPGPYPWRNGPNDWRPAHIHFAISGPSIATKLITQLY
FEGDPLIPMCPIVKSIANPQAVQQLIAKLDMSNANPMDCLAYRFDIVLRGQRKTHFENC
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccaggacaacagccgcttcgtgatccgtgatcgcaactggcaccctaaagcc
cttacgcctgactacaagacctccgttgcccgctcgccgcgccaggcactggtcagcatt
ccgcagtcgatcagcgaaaccactggtccggacttttcccacctgggcttcggcgcccac
gaccatgacctgctgctgaacttcaataatggtggcctgcccattggcgagcgcatcatc
gtcgccggccgtgtcgtcgatcagtacggcaagcctgtgccgaacactctggtagagatg
tggcaagccaacgccggcggccgctatcgccacaagaacgaccgctacctggcgccgctg
gacccgaactttggtggtgttggccggtgcctgaccgaccgcgacggctactacagcttc
cgcaccatcaagccgggcccgtacccatggcgcaacggcccgaacgactggcgcccggcg
catatccacttcgccatcagcggcccatcgatcgccaccaagttgatcacccagctgtac
ttcgaaggtgacccgctgatcccgatgtgcccgatcgtcaagtcgatcgccaacccgcaa
gccgtgcagcagttgatcgccaagctcgacatgagcaacgccaacccgatggactgcctg
gcctaccgcttcgacatcgtgctgcgcggccagcgcaagacccacttcgaaaactgctga
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