Pseudomonas putida F1: Pput_5099
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Entry
Pput_5099 CDS
T00537
Name
(GenBank) glycine dehydrogenase (decarboxylating) beta subunit / glycine dehydrogenase (decarboxylating) alpha subunit
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
ppf
Pseudomonas putida F1
Pathway
ppf00260
Glycine, serine and threonine metabolism
ppf00630
Glyoxylate and dicarboxylate metabolism
ppf00785
Lipoic acid metabolism
ppf01100
Metabolic pathways
ppf01110
Biosynthesis of secondary metabolites
ppf01200
Carbon metabolism
Module
ppf_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Pput_5099
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Pput_5099
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Pput_5099
Enzymes [BR:
ppf01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
Pput_5099
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
DUF5529
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ABQ81217
UniProt:
A5WAQ7
LinkDB
All DBs
Position
complement(5730433..5733306)
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AA seq
957 aa
AA seq
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MSQSPSLHQLQELNPFLRRHLGPDATEQQAMLNALGIASRNELIEQTVPPDIRLNRPLDL
PAALDEQAALAKLAGYAEQNQVWTSLIGMGYHGTITPTVILRNVLENPGWYTAYTPYQPE
IAQGRLEALLNFQQMVIDLTGLPLANASLLDEATAAAEAMALAKRVARNKSNAFFADEHC
HPQTLSVLKTRAEGFGFELIVDTVDNLAKHSVFGALLQYPDTHGEVRDLRPLIDQLHGQQ
ALACVAADLLSLVVLAPPGELGADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGR
IIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLQRI
AQRVHRLTFILAAGLEAKGIKRLNQHFFDTLTLNVGGAQAAIIESAEAAHINLRILGRGH
LGVSLDETCNEQTVLRLLDIFLGVDHGLEITALDQLALPEGIPASLVRRTPFLAHPVFNL
HHSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATSEMIPITWSGFAQLHPFAPAAQ
AAGYKAMIDELESWLCAITGFDAICMQPNSGAQGEYAGLMAITRYHRSRHQPMRTLCLIP
SSAHGTNPASAQMAGMDVVIVDCDNDGNVDLADLKAKAHAAGERLSCLMITYPSTHGVYE
EGIREICDVVHQHGGQVYMDGANLNAQVGLARPADIGADVSHMNLHKTFCIPHGGGGPGM
GPIGIRAHLKPFVASHPVVPVPGLDPNNSAVSAAPWGSASILPISWMYIAMMGPQLADAS
EVAILSANYLASQLGAAFPVLYRGRNQRVAHECILDLRPLKALTGISEEDVAKRLMDYGF
HAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLAIRAEIEEVQQGNWPAENNPLKHAPH
TLADVLGGWDRPYSLEQAVAPSAHVRQHKYWPAVNRVDNVYGDRNLFCACVPVEAYR
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtcgccatccctgcatcaactgcaagagctcaacccatttctgcgccgtcac
ctgggccccgatgccacagagcagcaggccatgctcaacgcgctgggtatcgccagccgc
aacgagctgatcgagcagaccgttccccccgacatccgcctcaatcgccccctcgacctc
ccagcggcactggacgagcaagccgccctggccaagctggccggttatgccgaacagaac
caggtctggaccagcctcatcggcatgggctaccacggcaccatcacccccacggtcatc
ctgcgcaacgtgctggaaaaccccggttggtacaccgcctacacaccctaccaacccgaa
attgcccaaggccggctggaggcgttgctgaacttccagcaaatggtcatcgacctcacc
ggcctgcctctggccaatgcctcgctgcttgatgaagccaccgctgccgccgaagccatg
gccctggccaagcgggtggcacgcaacaagagcaacgccttcttcgccgatgagcactgc
catccgcagaccctatcggtactcaagacccgcgccgaggggttcggcttcgagctgatc
gtcgatactgtggataaccttgccaaacactcggtgttcggcgctttgctgcagtacccc
gacacccacggcgaagtgcgcgatttgcgcccgctgatcgaccagttgcacggccaacag
gccttggcctgcgtagccgctgacctgctgagcctggtggtgctggcaccgcccggagag
ctgggcgccgatgtggtgctgggttcgacccagcgctttggtgtgccgatgggctacggc
gggcctcacgcggcctatttcgcctgtcgcgacgactacaagcgagccatgccggggcgc
atcatcggcgtgtcccgcgatgcccgtggcaacaccgcattacggatggccctgcaaacc
cgcgagcagcatattcgccgcgaaaaggccaactccaacatctgcacggcccaggtgctg
ctggccaacattgccggcttctacgcggtgtaccacggcccggaaggcctgcagcgcatc
gcgcagcgtgtgcaccggctgaccttcatcctggctgccggccttgaggccaaaggcatc
aaacgcctcaatcagcacttcttcgacacccttaccctgaatgttggtggtgcccaggct
gccatcattgaaagcgccgaggccgcgcacatcaatttgcgcattctcggtcgcgggcac
ctgggcgtgagcctggacgaaacctgcaacgaacagacggtgctgcgcctgctcgacatc
ttcctgggggtggatcatggcctggaaatcaccgccctcgaccagctggccctgcctgaa
ggcatccccgccagcctggtgcgacgcacgccattcctcgcccaccccgtgttcaacctg
caccacagcgaaacagagatgctgcgctacctcaagcagctagagaacaaggacctggcg
ctgaaccagtcgatgattccgctgggctcgtgcaccatgaagctcaacgccaccagtgag
atgatccccatcacctggtccggttttgcccagctgcacccgttcgctccggcggcccag
gcggcaggctacaaggcgatgatcgacgaactggaaagctggctgtgcgcgatcaccggt
ttcgatgcgatctgcatgcagcccaactccggtgctcagggtgaatacgccggcctgatg
gccattacgcgctatcaccgcagccgccatcagccgatgcgcacgttgtgcctgatcccg
tcgtcggcccacggcaccaacccggcgtcggcacagatggccggcatggacgtggtgatc
gtcgattgcgacaacgatggcaacgtcgacctggctgacctcaaagccaaggcacacgcg
gccggggagcgtctgtcgtgcctgatgatcacctacccctcgacccacggtgtgtacgag
gaagggatacgcgaaatctgcgatgtggtgcaccagcacggcggccaggtttacatggac
ggtgccaacctcaatgcgcaggtgggcctggcgcgccccgcagacattggggccgatgtt
tcacacatgaacctgcacaagacgttctgcattccccacggcggtggcggcccgggtatg
gggccgatcggtatccgcgcgcacctcaagccgttcgtcgccagccacccggtggtgccg
gtgcctgggctggacccgaacaacagcgcggtcagcgccgcgccctggggcagcgcaagc
atcttgccgatcagctggatgtatatcgccatgatgggcccgcagctggccgacgccagc
gaggtggctatcctttcggccaactacctggccagccagttgggcgcggcgttcccggtg
ctataccgcggccgcaaccagcgcgtggcgcatgaatgcatcctcgacctgcggccattg
aaagcgctgacaggcatcagcgaagaggacgtggccaagcgcctgatggactatggcttc
cacgcaccgaccatgtcgttcccggtgccgggcacgctgatggtggagccgaccgagagt
gagtcgaaggccgagctggaccggttcgtcgaggcgatgctggcgattcgggcggaaatt
gaagaagtacagcagggcaactggccagcggagaacaacccgctgaagcatgcaccgcat
accttggctgatgtgctgggggggtgggacaggccgtatagcctggagcaggccgtggcc
cccagtgctcacgtgcgccagcacaaatactggccggcggtgaaccgggtagacaacgtg
tatggggacagaaacctgttctgtgcgtgtgtgccggtggaggcttatcgctga
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