KEGG   Pseudomonas putida GB-1: PputGB1_0512
Entry
PputGB1_0512      CDS       T00650                                 
Name
(GenBank) excinuclease ABC, A subunit
  KO
K03701  excinuclease ABC subunit A
Organism
ppg  Pseudomonas putida GB-1
Pathway
ppg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ppg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PputGB1_0512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppg03400]
    PputGB1_0512
DNA repair and recombination proteins [BR:ppg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PputGB1_0512
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      PputGB1_0512
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N nSTAND1 AAA_29 AAA_16 AAA_23 AAA_22 RsgA_GTPase BCA_ABC_TP_C Viral_helicase1 nSTAND3 DnaJ_CXXCXGXG APS_kinase cobW Zn-ribbon_8 AAA_21 AAA_25
Other DBs
NCBI-ProteinID: ABY96423
UniProt: B0KK95
LinkDB
Position
complement(584379..587213)
AA seq 944 aa
MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPRC
PDHDIPLEAQTISQMVDLVLERPEGSKLMLLAPVVRERKGEHLAVFDELRAQGFVRARVN
GKLYELDELPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE
QGEEMIFSARFACPVCGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDTKRLVNAELT
LAEGAIRGWDRRNVYYFQMLGSLAAHYGFSLEEPFGELSAEHQKVILQGSGKQSVDFKYL
NDRGDIVKRSHPFEGIVPNLERRYRETESATVREELAKFLGTQPCPDCRGTRLRREARHV
WVGEKTLPAVTNLPIGEASNYFGELTLTGRRGEIAAKILKEICERLQFLVNVGLDYLTLD
RSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLATLNHLRDLGNTV
IVVEHDEDAIRLADYVVDIGPGAGVHGGQIVAEGSPQEVMDHPDSLTGKYLSGRKKIAVP
AKRTPRNKKLQLKLKGARGNNLQNVDLEIPVGLMTCVTGVSGSGKSTLINNTLFPLAATA
LNGASSLEAAPHGSMDGLQHLDKVVDIDQSPIGRTPRSNPATYTGIFTPIRELFSGVPES
RSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEIKYK
GKNIHEVLEMTIEDAREFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLS
RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL
VDLGPEGGSKGGQIIACGTPEELSEMKQSYTGHYLKPLLERDRA
NT seq 2835 nt   +upstreamnt  +downstreamnt
gtggacaagatcctgattcgtggggcacgtacccacaacctgaagaacatcgacctgacc
ctgccccgggacaagctgatcgtgatcaccggcctgtccggttccggcaagtcgtccctg
gcgttcgataccttgtacgccgaaggccaacgccgctacgtcgaatcgctgtcggcctac
gcccggcagttcctgtcgatgatggaaaagcccgacgtcgacaccatcgaaggcctgtcg
ccggcgatttccatcgagcagaagtcgacctcgcacaacccgcgctccacggtcggcacc
attaccgaaatctacgactacctgcgcctgctgtacgcccgagtcggcaccccccgctgc
ccggaccacgacatcccgctggaggcgcaaacgatcagccagatggtcgacctggtgctg
gagcgcccggaaggcagcaagttgatgctgctggcaccggtagtgcgcgaacgcaagggc
gagcatctggcggtgttcgacgaactgcgggcccagggcttcgtgcgggcccgggtcaac
ggcaagctctacgagctcgatgagctgcccaagctggacaagcagaaaaagcacagcatc
gatgtggtggtggaccgcttcaaggtccgcgccgacctgcagcagcgcctggcggagtcg
ttcgagaccgccttgaagctggcggacggcatcgctctggtggcgccgatggacgacgag
caaggcgaagaaatgatcttctccgcgcgcttcgcatgcccggtgtgcggccacgcgatc
agcgagctggagccgaagctgttttccttcaacaacccggccggtgcctgcccgacctgc
gatggcctgggggtaaaacagttcttcgacaccaagcgcctggtcaatgccgaactcacc
cttgccgaaggcgcgatccgcggctgggaccggcgtaacgtgtactacttccagatgctc
ggctcgctggccgcacattatggcttcagcctcgaagagccattcggcgaattgtcggcc
gaacaccagaaggtgattctgcagggcagtggcaagcagagtgtcgacttcaagtacctc
aacgaccgtggcgatatcgtcaagcgctcacacccgttcgaagggattgtgccaaacctg
gagcgccgctaccgcgaaaccgaatcggccaccgtgcgtgaagaactggccaagttcctc
ggcacgcaaccttgcccagattgccgaggtacacgcctgcgccgcgaggcacgccatgta
tgggtgggcgaaaagaccctgccagccgtcaccaacctgccgatcggtgaagccagcaac
tactttggcgagctgaccctgaccgggcgccgtggcgaaatcgcggcgaagatcctcaag
gagatctgcgagcgcctgcagtttctggtcaatgtcggcctcgactacctgaccctggac
cgtagcgctgacaccctgtcaggtggtgaagcacaacgtatccgcctggctagccagatc
ggcgcgggcttggtgggggtgatgtacattcttgatgaaccgtccatcggccttcatcaa
cgcgataacgaccgcttgctggccaccctcaaccacttgcgcgacctgggtaacacggtg
atcgtggtggaacacgacgaggacgccattcgcctggccgactacgtcgtcgacatcggc
ccaggtgccggtgtgcacggtgggcagatcgtcgcggagggctcgccacaggaggtcatg
gaccatcccgattcgttgacgggcaagtacctgtccgggcgcaagaagatcgccgtaccg
gccaagcgcacgccgcgcaacaagaaactgcagctcaagctcaagggcgcgcgaggcaac
aacctgcagaacgtcgacctggaaatcccggtgggcctgatgacctgcgtgaccggggtg
tccgggtcgggcaaatcgacgctgatcaacaacaccctgttccccttggccgccaccgcc
ctcaatggcgcaagcagcctggaagccgcaccgcatggcagcatggacggcctgcaacac
ctggacaaagtggtggacatcgaccagagcccgatcggccgcaccccgcgttccaacccg
gcgacctacaccggtatcttcacgccgatccgcgagctgttctcaggggtgccggaatcg
cgttcacgtggttatggcccagggcgcttctcgttcaacgtcaaaggcggccgttgcgag
gcctgtcagggcgatggcctgatcaaggtggaaatgcacttcctgccggacatctacgtg
ccgtgcgacgtgtgcaagagcaagcgctacaaccgagaaacgctggagatcaagtacaag
ggcaagaacatccacgaggtgctggaaatgaccatcgaggatgcccgcgagttcttcgat
gcggtaccggcgctggcgcgcaagctgcaaacgctgatggatgtgggcttgtcgtacatc
aagctggggcagtcggcaaccacgctgtccggtggtgaagcgcagcgggtgaagctgtca
cgcgagctgtccaagcgcgatactggcaagaccctgtacatcctcgacgagccgaccacg
ggcctgcacttcgccgacatccagcagttgttggacgtgttgcatcgcctgcgcgaccac
ggcaataccgtggtggtgatcgagcataacctggatgtgatcaagaccgccgactggctg
gtggacctgggacccgagggtggctccaagggtgggcagatcattgcctgcggcacgccg
gaagagctgagcgagatgaaacagtcgtacaccggccattacctgaaaccgctgctggag
cgggaccgagcctga

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