Pseudomonas putida GB-1: PputGB1_0745
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Entry
PputGB1_0745 CDS
T00650
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppg
Pseudomonas putida GB-1
Pathway
ppg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PputGB1_0745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppg03021
]
PputGB1_0745
Transcription machinery [BR:
ppg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PputGB1_0745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_24
GerE
HTH_IclR
HTH_40
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
ABY96655
UniProt:
B0KNB5
LinkDB
All DBs
Position
848235..848738
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AA seq
167 aa
AA seq
DB search
MSSLPHNAQVGELYRGHHSWLRGWLFKRLECQHQAADLAQDTFLRLLGRDTLNGLREPRA
FLATVAKGLVVDHYRRLSLERAWLDSLAALPEPEAPSAEARVLVLETLVEIDRMLDGLKP
KVRSAFLLSQLDGLTYPQIAEQLGLSLSSVQQYMTQAFGHCYRVLYS
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtcgctgccccacaacgctcaagtcggcgagctttaccgtggccatcactcctgg
ctgcgtggttggctgttcaagcgcctggagtgccagcaccaggctgccgacctggcccag
gacacgttccttcgcctgctggggcgtgacaccttgaatggcctgcgcgagccacgtgca
tttctggccaccgtcgccaaggggctggtggtggaccattatcgccggctgagcctggaa
cgggcctggctcgacagcctcgcggcgctgcctgagccggaagctccgtcagccgaagcg
cgggtgctggtgctggaaaccctggtggaaatcgaccggatgctcgatgggctgaagccc
aaggtgcgtagcgcgttcctgctgtcgcagctggacgggctgacttatccacaaattgcc
gaacagctgggcctctcgctcagttcggtgcaacagtacatgacccaggcgttcggccat
tgctaccgggtgctgtattcgtga
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