Pseudomonas putida GB-1: PputGB1_3832
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Entry
PputGB1_3832 CDS
T00650
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
ppg
Pseudomonas putida GB-1
Pathway
ppg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PputGB1_3832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppg03400
]
PputGB1_3832
DNA repair and recombination proteins [BR:
ppg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PputGB1_3832
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PputGB1_3832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_C
Toprim
RecR_ZnF
HHH_5
DZR
HHH
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ABY99722
UniProt:
B0KPW7
LinkDB
All DBs
Position
complement(4270794..4271396)
Genome browser
AA seq
200 aa
AA seq
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MSFSPLIRQLIDGLRILPGVGQKTAQRMALQLLERDRSGGLRLAQALTQAMEGVGHCRQC
RTLTEQELCPQCADTRRDDTQLCVVEGPTDVYAVEQTGYRGRYFVLKGHLSPLDGLGPEA
IGIPQLMARIEEQGTFTEVILATNPTVEGEATAHYIAQLLSEKGLAATRIAHGVPLGGEL
ELVDGGTLAHAIAGRRPISL
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcagccccctcattcgccaactgatcgatggtttgcgcatcctcccaggtgtc
ggccagaaaaccgcccagcgcatggccttgcagttgctcgagcgagaccgcagcggcggc
ctgcgcctggcccaggcgctgacccaggccatggagggggtaggccattgccgccagtgc
cgcaccctgaccgagcaggagctgtgcccgcaatgcgccgacacgcgccgtgacgatacc
cagttgtgcgtggtcgaggggccgaccgatgtgtatgcggtggaacagacgggctaccgt
ggccgttacttcgtactcaagggccacctgtcgccgctggacggcttggggccggaggcg
atcggcattccgcaactgatggcccgcatcgaggagcagggcacctttaccgaggtgatc
ctggcgaccaacccgacggtggagggcgaggcgacggcgcattacattgcgcagttgttg
agcgagaaggggttggcggcaacgcggattgcccatggtgtgccgctgggcggcgagctt
gagctggtggatggcgggaccttggcccatgccattgcagggcgccggcctatttcgctc
tga
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