Pseudomonas putida GB-1: PputGB1_4374
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Entry
PputGB1_4374 CDS
T00650
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ppg
Pseudomonas putida GB-1
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppg03019
]
PputGB1_4374
03009 Ribosome biogenesis [BR:
ppg03009
]
PputGB1_4374
03036 Chromosome and associated proteins [BR:
ppg03036
]
PputGB1_4374
Enzymes [BR:
ppg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PputGB1_4374
Messenger RNA biogenesis [BR:
ppg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PputGB1_4374
Ribosome biogenesis [BR:
ppg03009
]
Eukaryotic type
90S particles
RNase
PputGB1_4374
Prokaryotic type
rRNA processing factors
PputGB1_4374
Chromosome and associated proteins [BR:
ppg03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PputGB1_4374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
ABZ00263
UniProt:
B0KV27
LinkDB
All DBs
Position
complement(4898459..4899148)
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AA seq
229 aa
AA seq
DB search
MTASLARLERKLGYTFKNQDQMLLALTHRSYAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLARLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDADMDTARERVLAWLADEFEGLTLVDTNKDPKTRLQEFLQSRSCELPRYEVVDIQG
EPHCRTFFVECEVVLLNNKSRGQGVSRRIAEQVAAASALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttcccttgcccgtctggagcgaaagctcggttacaccttcaagaaccaggac
cagatgctcctggcgctgacccatcgcagttacgccgggcgcaacaatgagcgcctggag
tttctcggcgatgccattctcaacttcgtcgccggcgaagcgctgttcgagcgcttcccg
caggcccgcgaaggccagctttcgcgcctgcgcgcgcgcttggtcaagggcgagaccctg
gcccgcctggcccgtggtttcgacctgggcgaatacctgcgcctgggttcgggtgagctc
aaaagtggcggtttccgtcgcgagtcgatcctggccgacgccctggaggcactgattggt
gccatctacctggacgctgacatggacactgcccgggaacgcgtcctggcctggctggcc
gacgagttcgagggcctgaccctggtcgacaccaacaaggacccgaaaacccgcctgcaa
gagttcctgcagtcgcgcagctgtgagctgccgcgttacgaagtagtggatatccagggt
gaaccgcactgccgcaccttcttcgtcgaatgcgaagtggtactgctgaacaacaagagc
cgtggtcagggcgttagccggcgtatcgccgagcaagtcgccgccgcgtctgcactgatc
gccctgggcgtggagaatggcaatgactga
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integrated database retrieval system