Pseudomonas putida GB-1: PputGB1_4510
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Entry
PputGB1_4510 CDS
T00650
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ppg
Pseudomonas putida GB-1
Pathway
ppg00470
D-Amino acid metabolism
ppg00550
Peptidoglycan biosynthesis
ppg01100
Metabolic pathways
ppg01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PputGB1_4510
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PputGB1_4510
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PputGB1_4510
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppg01011
]
PputGB1_4510
Enzymes [BR:
ppg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PputGB1_4510
Peptidoglycan biosynthesis and degradation proteins [BR:
ppg01011
]
Precursor biosynthesis
Amino acid ligase
PputGB1_4510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
RimK
ATPgrasp_YheCD
ATP-grasp_5
GARS_A
TTL
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
ABZ00397
UniProt:
B0KFS4
LinkDB
All DBs
Position
complement(5046037..5046993)
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AA seq
318 aa
AA seq
DB search
MTSAYDKLHSTLDVKAFGRVAVLYGGKSAEREVSLKSGAAVIDALTTAGVDVVAIDVGDD
LLARLQSEEIDRAFIILHGRGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQVWQ
SLGIPTPRHAVLASESDCLQASTELGFPLIVKPAHEGSSIGMAKVNSAQELVAAWQDAAK
YDSQVLVEQWIHGPEFTIAVLRGQVLPPIALGTPHVFYDYDAKYIANDTQYRIPCGLDSA
KEQELIDLTARACDAIGIEGWGRLDVMQDEQGRFWLLEVNTAPGMTDHSLVPMAARAAGL
DFQQLVLAILAESVATRG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcgcctacgacaagctgcactccaccttggacgtcaaggcattcggccgcgtt
gccgtgctgtacggtggcaagagcgccgagcgtgaggtgtcgttgaagtctggcgctgcg
gtgatcgatgcgctgacaactgccggtgtcgacgtggttgccatcgacgtcggtgacgac
ctgctcgcgcgcctgcaaagcgaggaaatcgaccgcgccttcatcatcctccacggccgt
ggcggtgaagacggcagcatgcaaggcctgctggagtgccttggcatcccctacaccggc
agcggcatccttgcttcggcgctggccatggacaagctgcgcaccaagcaggtgtggcag
agcctgggcattccgaccccgcgtcacgcggtattggcgagcgaaagcgattgtttgcag
gccagtacggaactgggcttcccgcttatcgtcaaacccgcccatgaaggctctagcatc
ggcatggccaaggtgaacagcgcccaggaactggtcgccgcctggcaggacgccgccaaa
tacgattcccaggtactggtggaacagtggatccacggcccggagttcaccatcgcggta
ctgcgcggccaggtgctgccgccgatcgccctgggtacgccgcacgtgttctacgactac
gacgccaagtacatcgccaacgatacccagtaccgcatcccgtgcggcctggatagcgcc
aaggaacaggaactgatcgacctgaccgcacgtgcctgcgatgccatcggcatcgaaggc
tgggggcggctggacgtgatgcaggacgagcagggccggttctggctgctcgaagtcaac
accgcaccaggcatgacagatcatagcctggtgcccatggcggcccgcgcggccggcttg
gacttccagcaactggtgctggcaatcctggccgaaagcgtggcgacgcgaggttaa
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