KEGG   Pseudomonas putida GB-1: PputGB1_4954
Entry
PputGB1_4954      CDS       T00650                                 
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
ppg  Pseudomonas putida GB-1
Brite
KEGG Orthology (KO) [BR:ppg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppg03019]
    PputGB1_4954
   03009 Ribosome biogenesis [BR:ppg03009]
    PputGB1_4954
Messenger RNA biogenesis [BR:ppg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PputGB1_4954
Ribosome biogenesis [BR:ppg03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    PputGB1_4954
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: ABZ00839
UniProt: B0KL03
LinkDB
Position
complement(5527134..5527676)
AA seq 180 aa
MQNPQNLIWIDLEMTGLDPDSDVIIEMATIVTDSELNTLAEGPVIAIHHSDDVLARMDEW
NTRTHGASGLTQRVRESKVSMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMR
NLENYFHYRNLDVSTLKELAARWAPNVRDSFKKGNTHLALDDIRESIAELRHYREHFIKL
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcaaaacccacagaacctgatctggatcgacctggaaatgaccggcctggatccagac
agcgacgtcatcatcgaaatggcaaccatcgtcaccgacagcgagctgaacaccctggcc
gaagggccggtgatcgccatccaccacagtgacgacgtgctggcgcgtatggatgagtgg
aacacccgcacccatggcgcttcgggcctgacccagcgcgtgcgcgagagcaaggtcagc
atggctgaagccgaggcgcagaccatcgccttccttgaacagtgggtacccaaaggcaag
tcgccgatctgcggcaacagcatctgccaggaccgccgtttcctctaccgtcacatgcgc
aacctggaaaactacttccactatcgcaacctggatgtttccactctgaaggagctggcc
gcgcgctgggcgccgaatgtgcgtgacagcttcaagaagggcaatacccacctggcgctg
gacgatattcgcgagtcgatcgccgaactgcgtcactaccgcgagcacttcatcaagctg
tga

DBGET integrated database retrieval system