Pseudoalteromonas phenolica: PP2015_1032
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Entry
PP2015_1032 CDS
T04165
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pphe
Pseudoalteromonas phenolica
Brite
KEGG Orthology (KO) [BR:
pphe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pphe03016
]
PP2015_1032
Enzymes [BR:
pphe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PP2015_1032
Transfer RNA biogenesis [BR:
pphe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PP2015_1032
Prokaryotic type
PP2015_1032
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ALO41550
UniProt:
A0A0S2K0H6
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All DBs
Position
I:1189236..1190174
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AA seq
312 aa
AA seq
DB search
MARRSKGRPVDGILLLHKPEGISSNKALQRAKGIYYAQKAGHTGALDPLATGMLPICFGE
ATKFSQFLLDTDKTYVVRAKLGERTTTSDSDGEVVETRPVAVTQEMLEEQVASFLGESDQ
YPSMYSALKYEGKPLYFYARQGIEVPRKCRKINVFSLTLDEYDAENEEIQMTAHVSKGTY
IRTIVDDLGEKLGCGAHVIMLHRSKVGHYPSDKMLTLEQLEEKLNQAKAEELPASTYLDE
LLLPMDTALVDLPSVEIDETQGIAFGHGQTVSCGELPDGPIKVVANGQFAGVGERNDQGL
LKAKRALSSQQD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacggtctaaaggtcgcccggttgatggcattttacttcttcacaagccagaa
ggcatttcttcaaataaagcattacagcgtgctaaaggtatttattacgcgcaaaaagca
ggtcacacaggggcgctagaccctcttgcgacaggcatgctaccaatttgttttggtgaa
gcgactaagttcagccagtttttacttgatactgataaaacctatgtcgtaagagcaaaa
ttaggcgaacgtaccactacctcagactctgacggtgaagtagttgaaacccgtccagtt
gcagtaacgcaagaaatgcttgaagagcaagtagctagctttttaggtgaatcagatcag
tacccttcgatgtactctgcgttgaaatatgaaggcaagcccctgtatttttatgcaaga
caaggtatcgaagtgccacgtaaatgtcgcaagattaatgtgttcagtttaacactagac
gaatatgatgctgaaaatgaagaaattcaaatgacagcgcacgtgtctaaaggcacttat
attcgcacgattgtggacgacctaggtgaaaagcttggttgtggcgcacatgtgattatg
cttcatcgttcaaaagtggggcattatccaagcgataaaatgctgacactagagcaactt
gaagaaaaactaaatcaggcgaaagcagaagagttacctgcaagtacgtatctagacgaa
ttgctgttacccatggataccgcactcgttgatttacctagtgttgaaattgatgaaacg
caaggcattgcatttggccacggtcaaacagtaagttgtggtgagttgccagatggcccg
attaaagtcgttgccaatgggcaatttgccggtgtgggtgaacgtaatgatcaaggctta
ctaaaagcaaaacgcgcactttcaagccagcaagattaa
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