Pseudoalteromonas phenolica: PP2015_2879
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Entry
PP2015_2879 CDS
T04165
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pphe
Pseudoalteromonas phenolica
Brite
KEGG Orthology (KO) [BR:
pphe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pphe03016
]
PP2015_2879
Enzymes [BR:
pphe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PP2015_2879
Transfer RNA biogenesis [BR:
pphe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PP2015_2879
Prokaryotic type
PP2015_2879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ALO43364
UniProt:
A0A0S2K5P3
LinkDB
All DBs
Position
I:complement(3286271..3287299)
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AA seq
342 aa
AA seq
DB search
MELHYLYDKPEAVADFKSQPEDFIVDEILDIELTGEGEHVCLHIIKKQINTLDVAKKIAK
QAGTHVKNVSYAGLKDRHGVCSQWFSVPVPIKKDVDFTELNDDFIFVAKQKRHNRKLRTG
CHSGNRFTITLRNIDKPLDILSRINAVRQGVPNYFGEQRFGHDGHNLTMAERMFAGEHIR
DRKLRSIVISAARSHIFNQLVSMRVKEHGLAKTWHREIFMLEGSNAFFEDDISDENIARL
TSGDICLSAPLVGKGEKGLIAQEKDFLKAFNAWHHGLAELGLKNERRALRLIPIDLEVKT
LSSDSIELHFALPKGTFATAVLRELVNYVDVNKSAFANKDER
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaattgcattatctgtatgacaagcctgaagcggtagctgattttaaaagtcagcca
gaagacttcattgtagatgaaatattggatattgagctgaccggcgaaggtgaacatgtc
tgtttgcatattattaaaaaacagataaacacgttagatgtcgctaaaaaaattgcaaaa
caagctggaacacatgtaaaaaacgtcagctatgcgggactgaaagatcgccatggtgtt
tgtagccagtggtttagtgtccctgttcctattaagaaagacgttgattttaccgagcta
aacgatgactttatttttgttgcaaaacaaaagcgtcacaacagaaagctaagaacaggc
tgtcactcaggtaatcgctttacgatcacactaagaaacattgataagccattagatatt
ttgtcacgtattaatgcggtgcgtcagggcgtgccaaactactttggtgaacaacgcttt
ggtcatgatggtcataaccttactatggctgagcgcatgtttgcaggtgaacatattcgc
gacagaaaattacgtagtatcgttatttctgctgctcgctcacacattttcaatcagtta
gtgagtatgcgtgtaaaagaacatggcttagcgaaaacctggcatagagaaatctttatg
ctagaaggctctaatgcgttctttgaagatgatatcagcgatgaaaacattgcaaggcta
acctccggagacatttgcttgtcggcacctctggtcggtaaaggtgaaaaagggttaatt
gcgcaagaaaaagactttcttaaagcctttaatgcttggcatcatggtcttgccgaatta
ggattaaaaaatgagcgccgtgctctgcgattgatccccatagatcttgaagtgaagacc
ttgtcgtcagacagtatcgaattacactttgcattacctaaagggacattcgccacagct
gtacttagagagctagttaattacgttgatgtgaataaaagcgcatttgcaaataaggac
gaacgatga
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