Pseudoalteromonas phenolica: PP2015_490
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Entry
PP2015_490 CDS
T04165
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
pphe
Pseudoalteromonas phenolica
Brite
KEGG Orthology (KO) [BR:
pphe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pphe03021
]
PP2015_490
Transcription machinery [BR:
pphe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PP2015_490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
GerE
DUF2089
HTH_Tnp_ISL3
HTH_40
HTH_10
HTH_16
Terminase_5
HTH_AsnC-type
HTH_24
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ALO41012
UniProt:
A0A0S2JYQ5
LinkDB
All DBs
Position
I:569220..569759
Genome browser
AA seq
179 aa
AA seq
DB search
MFFQSQDKLIKKAQKGDQAAWLKLIKQHEQQVYNHCLRLTGNSHDALDLMQEAFMSVYRS
LHNFHGQSQFKTWLFSVTQARCMDFFRKQRQSSPLEEVSEAAHTPSCPIQLQSDNQHIHA
ALQALPFEQRQIVELKFFQHFTFEEIAEQLAISPNTVKSRLYSALGKMKAPLEVIRVES
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
gtgttttttcaaagccaagacaaactcataaaaaaagcccaaaaaggcgaccaagcggct
tggctgaagcttatcaagcagcatgaacagcaggtgtataaccattgcctccgcctaact
ggcaatagccatgatgcacttgatttaatgcaagaagcttttatgagtgtctatcgctct
ttgcataactttcatggtcagagccaatttaagacttggttattttcggtgacccaagcg
cgttgtatggacttctttcgtaagcaaaggcagtctagcccgcttgaagaagtctctgaa
gctgcccatacacccagttgcccaattcaattacaaagtgataatcaacatattcacgct
gcgctacaggctttgccgttcgagcagcgacaaattgttgaactgaagtttttccagcat
ttcacctttgaagaaatcgctgagcagctggctatttcgccaaataccgttaaatcccgt
ttatatagtgcgcttggaaaaatgaaagcgccattggaggtgatccgtgtcgaatcatga
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