Pannonibacter phragmitetus: APZ00_14385
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Entry
APZ00_14385 CDS
T04214
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr00470
D-Amino acid metabolism
pphr00550
Peptidoglycan biosynthesis
pphr01100
Metabolic pathways
pphr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
APZ00_14385
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
APZ00_14385
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
APZ00_14385
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pphr01011
]
APZ00_14385
Enzymes [BR:
pphr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
APZ00_14385
Peptidoglycan biosynthesis and degradation proteins [BR:
pphr01011
]
Precursor biosynthesis
Amino acid ligase
APZ00_14385
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
RimK
Motif
Other DBs
NCBI-ProteinID:
ALV30109
UniProt:
A0A0U3PS14
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All DBs
Position
3131543..3132469
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AA seq
308 aa
AA seq
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MTGKHVAVLMGGWAHERPVSLSSGNACADALEARGFRVSRVDVDRSIAARLAELKPDVAF
NALHGPFGEDGCIQGLLEILNIPYTHSGVMASALAMNKVKAKAVMAAHGVPVTEHLIINR
RDVGHEHPMRPPYVIKPINEGSSFGVLIVKEDQLHPPQELTRDDWPYPDTMMCETYIPGR
ELTCAVMGDEALGVIDIVPKGHGFYDFEAKYAEGGSVHILPAKISPFIYQEVQKLTLTAH
RALGCRGVSRADFRFDERPDGSGTLICLEVNTQPGMTPTSLVPELAAYTGRDFGDLVTWM
VEDASCSR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtaagcatgtcgcggtactgatgggcgggtgggcgcacgagaggccggtgagc
ctttcgtccggcaatgcctgcgccgatgcgctggaagcgcgcggcttcagggtgtcgcgc
gtcgatgttgaccgttccatcgcagcccgtctggccgaactgaagccggatgtggccttc
aatgccctgcatggccccttcggcgaggatggctgcatccagggcctcctcgagatcctg
aacattccctacacgcattccggcgtgatggcctctgcccttgccatgaacaaggtgaag
gccaaggccgtgatggcggcgcatggggtgccagtcacggaacatctgatcatcaaccgg
cgggatgtggggcatgagcacccgatgcgcccgccctatgtgatcaagccgattaacgaa
ggctccagcttcggcgtgctgatcgttaaggaagaccagttgcatccgccgcaggagctg
acgcgcgatgactggccatatccggacacaatgatgtgcgagacctacattcctggccgc
gagctgacctgcgcggtgatgggagatgaggcgcttggagttatcgacattgtcccaaaa
gggcacggtttctacgattttgaagcgaaatatgcggaaggtggctctgttcacatcctt
cctgcgaaaatttcaccctttatttaccaagaagtacagaaacttaccttaacagcgcat
cgtgcgctcggctgccggggtgtttcgcgggcggatttccgcttcgatgagcgtccggat
gggtcgggtaccctgatctgcctggaagttaacactcaacctggaatgaccccaacctcg
ctggttccggaacttgccgcctacactggccgtgatttcggggatctcgtcacctggatg
gtggaggacgcaagttgctctcgctga
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