Pannonibacter phragmitetus: APZ00_22935
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Entry
APZ00_22935 CDS
T04214
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
APZ00_22935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pphr02000
]
APZ00_22935
Transporters [BR:
pphr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
APZ00_22935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ALV29546
UniProt:
A0A0U2WAW0
LinkDB
All DBs
Position
5033238..5034740
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AA seq
500 aa
AA seq
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MTRISALGLRRMALCSLSTFAILAAVPAEAARTDVTLGVRLEPPHLDPTAGAAAAIDEVV
FINLFEGLTQVAADGTVKPALAESWTISSDGKTYTFKLREGVTFHDGTTFDAGDVKFSLE
RAKADGSVNAQKARFEAIDSVEASSTTEVIITLKQPVGDFITLLGTGDAVIVAPESAETN
KTAPVGTGPFRFGQWVQGDRVELQKNADYWGTPVKLDKAVFKIIGDNAASFSALLSGDVD
GFPIYPAPENLPQFEADPRFAVVVGTTEGETVLATNNARKPFDDLRVRQAIAHLIDRQAL
IDGAQFGYGTPIGSHFAPHAPAYEDLTGTYPFDVEKARALLAEAGYADGFKATLKLPPPA
YARRSGEILAAQFKEAGIELEIIPLEWAQWLEQVFKGKDYDLSIVAHTEANDIDIYARDD
YYFNYKNPAFNELMAKVSVTSDEAERGALLRQAQEMLAKDAVNGFLFQLPKTGVWDVKLK
GLWENAPVQANDLTGVYWED
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgacgcggatttcagcccttggcctgcgccggatggcgctttgcagtctctcaacgttt
gcgatcctcgctgcagttcccgcagaggcggcgcgcacggacgtgacgctcggcgtacgg
ctggagccgccccatcttgatcccaccgcaggcgcggcagccgccatcgacgaggtggtg
ttcatcaacctctttgaaggcctgacgcaggttgcagccgacggcacggtgaagcccgcg
ctggccgaaagctggaccatctccagcgatggcaagacctacacattcaagctgcgcgaa
ggcgtgaccttccatgacggcaccacctttgatgccggtgacgtgaaattttcgctggag
cgggccaaggcagacggcagcgtcaacgcccagaaagcccggttcgaggcgatagacagc
gtcgaggcgagcagcaccaccgaagtgatcatcaccctgaaacagccggtgggcgatttc
atcaccctgcttggcaccggtgacgccgtgatcgtggcgccggaaagcgcggagaccaac
aagacggctcccgtcggcaccgggcctttccgcttcggccagtgggtgcagggtgaccgg
gtggaactgcagaagaatgcggactactggggcactccggtgaagctggacaaggcggtg
ttcaagatcattggcgacaatgctgcctctttctcggcgctgctgtcgggggatgtggac
ggtttcccgatctatccggcgccggagaacctgccgcaattcgaggctgatccgcgattt
gcagtcgtggtgggcacgacggaaggcgagacggtgctggccaccaacaacgccagaaag
ccctttgatgacctgcgggtgcggcaggccatcgcgcatctgatcgaccggcaggcgctg
attgacggggcgcagttcggctatggcacgcccatcggctcgcattttgccccgcatgct
ccggcctatgaagatctgaccggcacctatcccttcgacgtcgaaaaagccagggcgctg
ctggcggaggccggctatgcggatggcttcaaggcaacgctgaaactgccgcccccggcc
tatgcccgccgcagcggggaaattctggccgcccagttcaaggaagcgggcatcgagctg
gagatcattcctctggaatgggcgcagtggctggagcaggtgttcaagggcaaggactat
gacctcagcatcgtcgcccatactgaagccaatgatatcgatatctacgcgcgcgatgac
tactacttcaattacaagaaccccgccttcaacgagctgatggcaaaggtcagcgtcacc
agcgatgaggccgagcgcggcgcgctgctgcggcaggcgcaggaaatgctggcgaaggat
gccgtcaacggcttcctgttccagctgcccaagaccggcgtgtgggacgtgaagctgaag
ggcctttgggaaaatgcgcccgtgcaggccaatgacctgaccggcgtctattgggaagac
tga
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