Pseudomonas putida ND6: YSA_03642
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Entry
YSA_03642 CDS
T02170
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi03030
DNA replication
ppi03430
Mismatch repair
ppi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YSA_03642
03430 Mismatch repair
YSA_03642
03440 Homologous recombination
YSA_03642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppi03032
]
YSA_03642
03400 DNA repair and recombination proteins [BR:
ppi03400
]
YSA_03642
Enzymes [BR:
ppi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YSA_03642
DNA replication proteins [BR:
ppi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YSA_03642
DNA repair and recombination proteins [BR:
ppi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YSA_03642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Pantoate_transf
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AFK68736
UniProt:
I3UTB5
LinkDB
All DBs
Position
complement(1955102..1955713)
Genome browser
AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGISPGTGCRATEVAVVMLEGGRIVERYQSLMNAGVPVPAFVAGLTGIT
TAMLRSAPPVDKVMNEVAEFVGGTPLLAHNAAFDQKFWDYELSRIGRSRSQPFACSLLLS
RRLLPAAPNHKLGTLTRWAGLPDTGTAHRAMADAEMAANLLQHLAGVLRQDHGVQQLSHE
LLCRLQKTPAAKLREALAKYCRD
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtatcgctgtcatcgactttgaaaccaccggcatttcccccggtaccggctgc
cgtgccaccgaggtggcggtggtaatgctcgagggtgggcgcattgtcgagcgctaccag
agcctgatgaacgctggcgtgccggtgccggccttcgtcgcagggctgaccggcatcacc
accgccatgctgcgcagtgcgccgccggtggacaaggtgatgaacgaggtggccgagttc
gtcggtggcaccccattgttggcgcacaacgctgctttcgaccagaagttctgggactac
gagctaagccgtattggccgcagccgcagccagcccttcgcgtgttccctgttgctgtca
cggcgcctgctgcccgccgcgccgaaccacaagctgggcactttgacacgctgggctggg
ttgccggacacggggactgcgcaccgggccatggccgatgccgaaatggccgccaacctg
ctgcagcatctggcgggtgtgttgcgccaggaccacggggttcagcaactgtcgcacgag
ctgctttgccggctgcagaaaaccccggctgcgaagctgcgcgaagcgctggccaagtac
tgcagggattag
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