Pseudomonas putida ND6: YSA_03655
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Entry
YSA_03655 CDS
T02170
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent helicase HrpB [EC:
5.6.2.6
]
Organism
ppi
Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
YSA_03655
Enzymes [BR:
ppi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
YSA_03655
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
ResIII
AAA_19
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AFK68741
UniProt:
I3UTC0
LinkDB
All DBs
Position
complement(1958620..1961148)
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AA seq
842 aa
AA seq
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MISLPIDAALPALRQALENRDEVVLEAPPGAGKTTRVPLALLHEPWLAGQSILMLEPRRL
AARAAAERLASELGEQVGETVGYRIRLDSKVGPKTRIEVVTEGILTRRLQADPALEGVGL
LIFDEYHERSLDADLALALSLNGRELLRDDPPLKILLMSATLEGERLSRLLDDAPVVSSE
GRMHPVDIRWGRPFQPGEFIEPRVVDSVLHALADQAGSVLVFLPGQAEIRRVHQSLQEVL
GARPEILLCPLHGELDLNAQRAAIDPPAKGLRKVVLATNIAETSLTIDGVRVVIDAGLAR
VPRFDPGSGMTRLDTQRISRASATQRAGRAGRLEPGVCYRLWSEAQHDQLAAHGSAEILQ
ADLAGLALQLARWGVTPEQLRWLDQPPAAAYAQSQDLLARLSAFRPGSRDTLSEHGQAMA
ELPAHPRIAHLLLRGQDLGLAQMACDVAALLGERDIQRGGGADLHSRLALVSGESKAARG
GQGGVQRARQLARQYRGLLRGKVGAPVADPDHPRWLGALLALAYPDRVAQQRRAGGAEYR
LANGRAALFGEVDALMKCPWLVIADLGSRQGQREERIYLAAEFDPALLEGVLAEQVERVD
ILDWDEREQVLRAERQVKVGELVLSREPLPGLDDEARARALLGLVRRKGLNLLTWTPELR
QWQARVALLRQLDLQKDGHSEWPDLGDEALLASLEDWLQPYLSKVSRLSHFAALDLPSML
RNLLPWPLPQRLEEQAPAHLAVPSGSNIRLDYSETPPILAVRLQELFGLADTPRIANGRQ
QVKLHLLSPARRPVQVTQDLASFWRTTYAEVKKDLKGRYPKHYWPDDPLVAEATARAKPR
GS
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgatttcattacccattgatgctgccttgcccgccctgcgccaggctctggaaaaccgt
gacgaagtggtgcttgaagcgccgcctggcgctggcaagaccacccgcgtgccactggcg
ctgctgcacgaaccgtggctggccgggcagagcatcctcatgctcgagccacggcgcctg
gctgcgcgggcagcggccgaacggctggccagtgagctgggcgagcaggttggggaaacg
gtgggttaccgcatccgtctggacagcaaggtcggcccgaaaacccgtattgaagtggtg
accgaaggcatcctcacacgccgcctgcaagccgacccggcgctggaaggggtgggcctg
ctgattttcgacgaatatcacgaacgcagcctggatgccgatctcgcacttgcgctgagc
cttaacggccgcgagttgctgcgtgacgacccgccactgaagattctgctgatgtccgcg
accctggaaggcgagcgcctgtcgcggttgctggacgatgccccggtggtcagcagcgaa
ggccgcatgcatccggtggatatccgctgggggcggccgttccagccaggcgagttcatc
gagccacgggtggtggacagcgtgctgcatgcgctggctgaccaggccggcagcgtgctg
gtgttcctgcctgggcaagccgagatccgccgggttcaccaaagccttcaggaggtactg
ggcgcgcgccccgagattctgctgtgcccgctgcatggcgaactcgacctcaatgcccag
cgtgccgctatcgatccgccggccaaggggttgcgcaaggtggtgctggccaccaacatc
gctgagaccagcctgaccatcgatggcgtgcgcgtggtgatcgacgcaggcctggcccgg
gtgccgcgcttcgaccccggcagcggcatgacccgcctggacacccagcgcatttcccgc
gccagtgccacccagcgcgctgggcgtgccggccgcctggagcccggcgtgtgctaccgc
ctttggtccgaggcccagcatgaccagctggccgcccatggcagtgccgagattctccag
gccgacctggccgggctggccctgcagctggcgcgctggggtgtaacccccgagcagttg
cgctggctcgaccagccgccagctgcagcgtacgcccagtcacaggacctgttggcgcga
ctcagcgccttccggccgggcagccgcgacaccctcagcgaacatggccaggccatggcc
gaactgccggctcacccacgcatcgcgcacttgttgctgcgcggccaggacctgggcctg
gcacagatggcatgcgatgtggctgcactgctgggggagcgggacatccagcgtggcggt
ggtgccgacttgcacagccggcttgcgctggtcagcggtgagagcaaggctgcgcgtggc
ggccaggggggtgtgcagcgtgctcgtcagctggcccggcaataccgtggcctgttgcgt
ggcaaggtcggtgcaccggttgccgatccggaccacccgcgctggctgggcgccctgttg
gcactggcctaccctgaccgggtcgcccagcagcgccgagcgggcggggcggagtatcgg
ctcgccaacggccgtgcggccctgtttggcgaagtcgatgcattgatgaagtgcccatgg
ctggtgatcgccgacctgggtagccgccaggggcagcgtgaggagcggatctatctggca
gccgaattcgatccggcgttgctcgagggtgtgctggccgaacaggtcgagcgggtcgat
atccttgattgggacgagcgcgagcaggtgttgcgcgccgagcgccaggtgaaggttggc
gaactggtcctcagccgcgagccgctgcccgggctggatgatgaagccagggcccgagcg
ctgctgggcctggtccggcgcaaaggtttgaacctgctgacctggacgccggaactgcgg
caatggcaggcacgtgtggcgctgttgcgtcagctcgacctgcagaaggatggccacagc
gaatggcctgacctgggggacgaggccctgctggccagcctggaagactggttgcagcct
tacctgagcaaagtatcgcgcctcagccactttgccgcgctggacttgccgtcgatgctg
cgcaacctgctgccctggccgctgccgcaacgcctggaagaacaggccccggcgcatttg
gccgtgccttccggctcgaacatccgcctggattacagcgaaaccccgccgattctcgcc
gtgcgtctgcaagaactgttcggccttgccgataccccgcgcatcgccaacggccggcag
caggtcaagctgcacctgctgtcaccggcacgtcggccggtgcaggtgacccaggacctg
gccagcttctggcgcacgacctatgccgaggtgaagaaagacctgaaagggcggtatccg
aagcattactggccggacgaccctctggtggccgaggctacggcgagggccaagccgaga
gggagctga
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