KEGG   Pseudomonas putida ND6: YSA_03717Help
Entry
YSA_03717         CDS       T02170                                 

Definition
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
  KO
K07258  serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Organism
ppi  Pseudomonas putida ND6
Pathway
ppi00550  Peptidoglycan biosynthesis
ppi01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ppi00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    YSA_03717
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases [BR:ppi01002]
    YSA_03717
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppi01011]
    YSA_03717
Enzymes [BR:ppi01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     YSA_03717
Peptidases [BR:ppi01002]
 Serine Peptidases
  Family S11: D-Ala-D-Ala carboxypeptidase A family
   YSA_03717
Peptidoglycan biosynthesis and degradation proteins [BR:ppi01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   YSA_03717
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Peptidase_S11 PBP5_C Beta-lactamase2 Beta-lactamase Peptidase_S13
Motif
Other DBs
NCBI-ProteinID: AFK68776
UniProt: I3UTF5
LinkDB All DBs
Position
complement(1989865..1991025)
Genome map
AA seq 386 aa AA seqDB search
MNITNLAKRLCLPVLLLITPAAFAAEQMTPAPPQLAAKSYVLMDASSGNVLVENNGDERL
PPASLTKLMTAYIATLDIRRGQIGESDPVTVSENAWRTGGSRMFIKVGSQVTVSDLLHGI
IIQSGNDASVALAEHIAGSEDAFADMMNKTAADLGMTNSHFMNPTGLPNPEHYSSAHDMA
TLARAIINVDPAHYAIYSQKEFFWNNIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVAS
AVRDGQRLIAVVFGTNSEQSRAAETQKLLTYGFRFFETQTFYQKGTELTQAPVWKGATSQ
IKAGLADDLTMTMPKGQLKRLQASMTMNPQLTAPIAKGDVIGKVEVKLDEKVVHSADLIA
LDGVEEGGFFRRMWDSIRLFFYGLFN
NT seq 1161 nt NT seq  +upstreamnt  +downstreamnt
atgaacatcaccaaccttgccaaacgactttgcctgcctgtactgctgctgatcacgcct
gccgccttcgcggcggagcagatgacgcctgcgccaccccaactggcagccaagtcctac
gtactcatggacgcgtccagcggcaacgtgctggtcgagaacaacggtgacgagcgcctg
ccgccagccagcctgaccaagctgatgaccgcctacatcgccaccctggacatccgccgc
ggccagatcggtgaaagcgacccggttactgtcagcgaaaacgcatggcgtaccggcggt
tcgcgcatgttcatcaaggttggcagccaggtcacggtcagcgacctgctgcacggcatc
atcatccagtccggtaacgacgcctcggtcgccttggccgagcacatcgccggcagcgaa
gacgcctttgccgacatgatgaacaagacggctgccgacctgggcatgaccaacagccac
ttcatgaacccgaccggcctgccgaaccccgagcactactcgtcggcgcacgacatggca
accctggcccgtgcgatcatcaatgtcgacccggcccactacgccatctactcgcagaaa
gagtttttctggaacaacatcaagcagcctaaccgcaacctgctgctgtggcgcgacaag
accgtcgatggcctgaaaaccggtcacaccgacgaagccggctactgcatggtggcttcg
gccgttcgtgacggccagcgcctgatcgccgtggtgttcggtaccaacagcgaacaatcg
cgtgctgccgaaacccagaagctgctgacctacggtttccgcttcttcgaaacccagacc
ttctaccagaagggcaccgagctgacccaggccccggtctggaagggcgctaccagccag
atcaaggctggcctggctgacgacctgaccatgactatgcctaaaggccaattgaagcgc
ctgcaggcttcgatgaccatgaacccgcagctcaccgcaccgatcgccaaaggtgacgtg
atcggcaaagtggaagtcaaactggacgagaaagtggttcacagcgccgacctgattgcc
cttgatggcgtcgaggaaggtggtttcttccgccgtatgtgggatagcatccgtctattc
ttctacgggttgttcaactga

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