Pseudomonas putida ND6: YSA_05657
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Entry
YSA_05657 CDS
T02170
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi00260
Glycine, serine and threonine metabolism
ppi00460
Cyanoamino acid metabolism
ppi00630
Glyoxylate and dicarboxylate metabolism
ppi00670
One carbon pool by folate
ppi00680
Methane metabolism
ppi01100
Metabolic pathways
ppi01110
Biosynthesis of secondary metabolites
ppi01120
Microbial metabolism in diverse environments
ppi01200
Carbon metabolism
ppi01230
Biosynthesis of amino acids
ppi01240
Biosynthesis of cofactors
Module
ppi_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
YSA_05657
09102 Energy metabolism
00680 Methane metabolism
YSA_05657
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
YSA_05657
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
YSA_05657
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
YSA_05657
Enzymes [BR:
ppi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
YSA_05657
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AFK69834
UniProt:
I3UWG3
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All DBs
Position
3053996..3055249
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANGAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTNTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNAAVFPGAQGGPLMHVIAAKAVCFKEALEPGFKAYQQQVIENAQAMAQ
VFIDRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVAQCVALAGWICDILDNLGDADVEADVAKNVAALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggttacgacgatgcactgctggcggcgatgaat
gccgaagaacagcgccaggaagatcacatcgagctgatcgcctcggagaactacaccagc
aagcgcgtcatgcaggcccaaggcagcggcctgaccaacaagtacgctgaaggctaccct
ggcaagcgttactacggtggctgcgagcacgtagacaaggtagaagccctggccatcgag
cgcgccaagcagctgttcggtgccgactacgcaaacgtccagccacactccggctcgtcg
gccaacggcgccgtctacctggccctgctgcaagccggtgacaccatcctgggcatgagc
ctggcccacggtggccacctgacccacggcgccaaagtgtcgtcctcgggcaagctgtac
aacgctgtccagtacggcatcgacaccaacaccggcctgatcgactatgacgaagtcgag
cgcctggcggtcgagcacaagccgaaaatgatcgttgccggtttctcggcctactccaag
acccttgacttcccacgcttccgcgccatcgccgacaaagtgggcgcactgctgttcgtc
gacatggcccacgttgccggcctggttgccgctggcctgtacccgaacccgatcccgttc
gctgatgtggtcaccaccaccacccacaagaccctgcgcggtccgcgtggcggcctgatc
ctggccaagtcgaacgaagagatcgagaaaaagctgaacgccgctgtattcccgggtgcc
cagggtggcccgctgatgcacgtgatcgctgccaaggcggtgtgcttcaaggaagcgctg
gagcctggattcaaggcctaccagcagcaagtgatcgaaaacgcccaggccatggcccag
gtgttcatcgaccgtggctacgatgtggtttccggtggcaccgacaaccacctgttcctg
gtcagcctgatccgtcagggcctgactggcaaagacgccgacgccgccctgggtcgtgcg
catatcaccgtcaacaagaacgccgtgccgaacgacccgcagtcgccgttcgtcacgtcg
ggcctgcgtatcggcaccccggccgtcaccacccgcggcttcaaggtcgcccagtgcgtg
gccctggctggctggatttgcgacatcctcgacaacctcggtgacgcagacgtcgaagcc
gatgtggcgaagaacgtcgcggccctgtgcgcagatttccctgtctaccgctga
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