Pseudomonas putida ND6: YSA_05856
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Entry
YSA_05856 CDS
T02170
Name
(GenBank) cAMP-regulatory protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi02020
Two-component system
ppi02024
Quorum sensing
ppi02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
YSA_05856
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YSA_05856
02025 Biofilm formation - Pseudomonas aeruginosa
YSA_05856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppi03000
]
YSA_05856
Transcription factors [BR:
ppi03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
YSA_05856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Crp
HTH_Crp_2
TrmB
MarR
HTH_23
HTH_11
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AFK69941
UniProt:
I3UWS0
LinkDB
All DBs
Position
complement(3180729..3181463)
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AA seq
244 aa
AA seq
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MSDKLAPNDWRFPPASLYKKPMPRIEQDFVMVASALPAKIKNIDKLLVHCQRRRYTAKSN
IICAGDRAETLSFIIKGSVTIIIEDDDGHEMIIAYLNHGDFFGELGLFEPVDGEQQRSAW
VRAKTECEVAEISYEKFRELARQDPEILYALGSQMAQRLRNTTRKVGDLAFFDVTGRVAR
CLLELCKQPDAMTHPDGMQIKITRQEIGRIVGCSREMVGRVLKDLEERSLVQVKGKTMVV
YGTR
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgataagctggcgccaaatgactggcgctttccgccagccagcctctataaaaag
cctatgcctcgtatcgaacaggatttcgtgatggtcgcctctgccctacccgccaagatc
aagaacatcgacaaactgctggtgcattgccagcgccgccgctacaccgccaaaagcaac
atcatctgcgccggcgaccgggccgaaacactgtcgttcatcatcaagggttcggtaacc
atcatcatcgaggacgacgacggccatgaaatgatcatcgcctacctcaaccatggcgat
ttctttggcgagttaggcctgttcgagcccgttgatggcgagcagcagcgcagtgcctgg
gtacgcgccaagaccgaatgcgaagtggccgaaatcagctacgaaaagtttcgcgaactg
gcgcgccaggaccctgaaatcctctacgccctgggcagtcaaatggcccagcgcctgcgc
aacactacgcgcaaggttggcgatttggcatttttcgacgtaaccgggcgagttgcccgt
tgcctgctggaactgtgcaagcagcccgacgccatgacccaccccgatggcatgcaaatc
aagattacccgtcaggaaatcggccgaatcgtcggttgctctcgggaaatggtcggccgc
gttctcaaggacctcgaggaacgcagcctggtgcaggtcaagggcaagaccatggtggtc
tacggtacccgctag
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