Pseudoalteromonas piscicida: B1L02_15400
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Entry
B1L02_15400 CDS
T04942
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ppis
Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppis03019
]
B1L02_15400
03009 Ribosome biogenesis [BR:
ppis03009
]
B1L02_15400
Messenger RNA biogenesis [BR:
ppis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B1L02_15400
Ribosome biogenesis [BR:
ppis03009
]
Eukaryotic type
Pre-60S particles
RNases
B1L02_15400
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ASD68261
UniProt:
A0A3B6Y5H8
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All DBs
Position
1:complement(3356555..3357100)
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AA seq
181 aa
AA seq
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MSFHESNLIWLDLEMTGLEPKTDKILEIATVITDGALNVLAEGPVVAIHQSDELLDNMDE
WCTNQHGRSGLTTRCKASKFTEADAVKQTLDFLKEWVPPGASPMCGNSIGQDRRFLNKYM
PELEAYFHYRNLDVSTIKELARRWKPELLGEIKKKSSHLALDDIKDSIMELKVYQEKFFK
V
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttcatgaatcaaacttgatctggctcgatctcgagatgacggggctggaaccg
aaaacagataaaatcttagaaatcgcgacggtgatcacagatggtgctctcaatgtttta
gctgaaggtccagttgtggcaattcatcaaagtgatgagctgttggacaatatggacgag
tggtgtaccaaccaacatggtcgctcaggtctaactactcgctgtaaagcaagtaagttt
acggaagcggatgcagttaagcaaacactagatttccttaaagagtgggtgccaccaggt
gcctctccaatgtgtggtaactctattggtcaagaccgtagattcctcaacaaatacatg
ccagagctagaagcttatttccactatcgcaatttggacgtcagtacgataaaagaactt
gcgagacgctggaagcctgagcttttgggtgagataaagaaaaaaagctctcatttagca
ctcgatgatatcaaagactccatcatggagctgaaagtttaccaagaaaaattcttcaaa
gtttaa
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