KEGG   Pseudoalteromonas piscicida: B1L02_15400
Entry
B1L02_15400       CDS       T04942                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
ppis  Pseudoalteromonas piscicida
Brite
KEGG Orthology (KO) [BR:ppis00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppis03019]
    B1L02_15400
   03009 Ribosome biogenesis [BR:ppis03009]
    B1L02_15400
Messenger RNA biogenesis [BR:ppis03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     B1L02_15400
Ribosome biogenesis [BR:ppis03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    B1L02_15400
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: ASD68261
UniProt: A0A3B6Y5H8
LinkDB
Position
1:complement(3356555..3357100)
AA seq 181 aa
MSFHESNLIWLDLEMTGLEPKTDKILEIATVITDGALNVLAEGPVVAIHQSDELLDNMDE
WCTNQHGRSGLTTRCKASKFTEADAVKQTLDFLKEWVPPGASPMCGNSIGQDRRFLNKYM
PELEAYFHYRNLDVSTIKELARRWKPELLGEIKKKSSHLALDDIKDSIMELKVYQEKFFK
V
NT seq 546 nt   +upstreamnt  +downstreamnt
atgtcttttcatgaatcaaacttgatctggctcgatctcgagatgacggggctggaaccg
aaaacagataaaatcttagaaatcgcgacggtgatcacagatggtgctctcaatgtttta
gctgaaggtccagttgtggcaattcatcaaagtgatgagctgttggacaatatggacgag
tggtgtaccaaccaacatggtcgctcaggtctaactactcgctgtaaagcaagtaagttt
acggaagcggatgcagttaagcaaacactagatttccttaaagagtgggtgccaccaggt
gcctctccaatgtgtggtaactctattggtcaagaccgtagattcctcaacaaatacatg
ccagagctagaagcttatttccactatcgcaatttggacgtcagtacgataaaagaactt
gcgagacgctggaagcctgagcttttgggtgagataaagaaaaaaagctctcatttagca
ctcgatgatatcaaagactccatcatggagctgaaagtttaccaagaaaaattcttcaaa
gtttaa

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