Pseudomonas plecoglossicida: RK21_00377
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Entry
RK21_00377 CDS
T03646
Name
(GenBank) ATP-dependent DNA ligase
Organism
ppj
Pseudomonas plecoglossicida
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
AJG11885
UniProt:
A0A0B5K653
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Position
complement(402820..404478)
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AA seq
552 aa
AA seq
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MKAFAELYLRLDATTSSTAKLTALREYFSTAPAGDAAWAVYFLAGGRPRQLVPTRVLREL
AGRLAGLPDWLFEECYQAVGDLAETISLLVPESHHPGDNGLARWVEAHLLPLRGLPVEEI
QQRLPPLWAQLDRPSLMLCLKLITGSFRVGVSKLLVTRALAQLAGLDAKCVAQRLVGYTD
ISHRPTAASYQRLIAPESDDEHSLRGGQPYPFFLAHPLQVSTEQLDTLLGPPSEWQIEWK
WDGIRAQVVKREGQLWVWSRGEELVTERFPELHSLAQTLPDGVVLDGEILVWKPGGSAAE
LAVQPFALLQQRLGRKTLGKKLLSDAPVVLQAYDLLEWRGEDWRSRPQHARRQQLEHVLE
EHPLAPVLLSPLLEGRDWADLACQREQSRSLGVEGLMLKQREALYGVGRTKDMGTWWKWK
IDPFSVDAVLIYAQRGHGRRASLYSDYTFAVWDAPAGTPGRALVPFAKAYSGLSDEEMRK
VDAIIRKTTVETFGPVRSVTPTLVFELGFEGIALSRRHKSGIAVRFPRMLRWRLDKPVEE
ADDLATLQALLA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcattcgccgagctgtacctgaggctggatgcgactacctccagcactgcaaag
ctcacggcgctacgcgaatatttcagcaccgccccggctggggatgccgcctgggcggtg
tacttcctggcaggtggccgccctcgccaactggtgcctacacgcgtgctgcgggagctg
gccggcaggttggcggggctgcctgactggctgttcgaggaatgctaccaggccgttggc
gacctggccgaaaccatttccctgctggtaccggaaagccaccaccctggcgacaacggc
ctcgcccgctgggtcgaagcccatctgctgccattgcgcggcctgccagtcgaggagatc
cagcaacgcctgccgcctctttgggcccagctggaccgccccagcctgatgctttgcctg
aaactcatcactggcagctttcgcgtgggcgtatcgaagctgttggtcactcgcgccctc
gcgcaactggccgggctggatgccaaatgcgtggcccagcgcctggttggctacaccgac
atcagccaccgcccgacggcagccagctatcaacggctgatagccccggaatcagacgat
gaacatagcttgcgtggcggccagccctacccgtttttcctggcccaccccctgcaggta
tcaaccgaacagctagatacactgctcgggccgccgagcgaatggcaaatcgagtggaaa
tgggacggcattcgtgcccaggtggtcaagcgcgaaggccagctgtgggtctggtcgcgc
ggtgaggaactggtcaccgaacgcttccccgaattgcacagcctggcgcagacgttaccc
gacggtgtcgtgctcgatggcgagatcctggtttggaaacctggtggctcagcggctgag
ctggccgtgcagccatttgccctgttgcagcagcgcctgggacgcaagaccttgggcaag
aagctgctgagcgacgcaccggtcgtgctgcaggcctacgacctgctggaatggcgaggc
gaggactggcgcagccggccgcagcatgcacgccgccagcagctggaacacgtgcttgag
gagcacccattggccccggtgttgctctcgcctctactcgaaggccgggactgggccgac
cttgcctgccagcgcgaacagtcccgcagtctgggggtggaagggctgatgctgaaacag
cgcgaggccttgtatggcgtggggcgcaccaaggacatgggcacctggtggaagtggaag
atcgacccgttcagcgtcgatgccgtgctgatctatgcccagcgcggccacggccggcgg
gccagcttgtacagcgactacaccttcgccgtgtgggacgcgccagccggtacgccgggt
cgggcactggtcccctttgccaaggcctattcagggctcagtgacgaagaaatgcgcaag
gtcgacgccatcatccgcaagaccacggttgaaaccttcgggccggtgcgcagcgtgacg
ccgacgctggtgttcgagttgggcttcgagggcatcgccctgtccaggaggcacaagagc
ggcatcgccgtgcgctttccgcggatgctgcgctggcggctggacaagccagtggaagaa
gcggatgacctggctacattgcaggcgctgctggcctga
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