Pandoraea pnomenusa 3kgm: U875_15775
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Entry
U875_15775 CDS
T02936
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ppk
Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppk03019
]
U875_15775
03009 Ribosome biogenesis [BR:
ppk03009
]
U875_15775
Messenger RNA biogenesis [BR:
ppk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
U875_15775
Ribosome biogenesis [BR:
ppk03009
]
Eukaryotic type
Pre-60S particles
RNases
U875_15775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CTD1
Motif
Other DBs
NCBI-ProteinID:
AHB06634
LinkDB
All DBs
Position
complement(3408135..3408773)
Genome browser
AA seq
212 aa
AA seq
DB search
MSVIPSKNPTPADAETTLARAEFNLVWLDMEMTGLQPDSDRIIEVAVVVTDSALTRRIEG
PVFAIHQSDAVLDGMDDWNKSTHGRSGLIDRVKASTIDEASAEVQLIEFLSRYVPPNKSP
MCGNSICQDRRFMARYMPRLEAFFHYRNLDVSTLKELCRRWEPTVYKGFTKRAAHTALAD
IHESIDELVYYREHFLKTAVPGAPDVPVANPD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttatcccatccaagaatcccacgcccgccgatgccgaaacgacgctcgcgcgc
gccgagttcaatttggtctggctcgatatggaaatgaccggcttgcagcccgacagcgac
cggatcatcgaagttgcggtggtcgtgaccgattcggcgctcacgcggcgcatcgaaggg
ccggtattcgccattcatcagtcggacgccgtgctcgatggcatggacgactggaacaag
tcgactcacggccgctcgggcctgatcgatcgcgtgaaggcatcgaccatcgacgaagcg
tcggccgaagtccaactgatcgagttcctgtcccggtacgtgccgccgaacaagtcgccg
atgtgcggcaactccatctgccaggatcgtcgcttcatggcgcgttacatgcccaggctc
gaggccttcttccattaccggaacctggacgtcagcacgctcaaggagctgtgccgccgc
tgggaaccgacggtctacaagggcttcaccaagcgggccgcccacacggcgctggccgac
atccacgaatccatcgacgaactggtctattaccgcgagcacttcctgaagactgccgtg
cccggcgccccggatgttccggtggccaacccggactga
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