KEGG   Pandoraea pnomenusa 3kgm: U875_15775
Entry
U875_15775        CDS       T02936                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
ppk  Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:ppk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppk03019]
    U875_15775
   03009 Ribosome biogenesis [BR:ppk03009]
    U875_15775
Messenger RNA biogenesis [BR:ppk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     U875_15775
Ribosome biogenesis [BR:ppk03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    U875_15775
SSDB
Motif
Pfam: RNase_T CTD1
Other DBs
NCBI-ProteinID: AHB06634
LinkDB
Position
complement(3408135..3408773)
AA seq 212 aa
MSVIPSKNPTPADAETTLARAEFNLVWLDMEMTGLQPDSDRIIEVAVVVTDSALTRRIEG
PVFAIHQSDAVLDGMDDWNKSTHGRSGLIDRVKASTIDEASAEVQLIEFLSRYVPPNKSP
MCGNSICQDRRFMARYMPRLEAFFHYRNLDVSTLKELCRRWEPTVYKGFTKRAAHTALAD
IHESIDELVYYREHFLKTAVPGAPDVPVANPD
NT seq 639 nt   +upstreamnt  +downstreamnt
atgtccgttatcccatccaagaatcccacgcccgccgatgccgaaacgacgctcgcgcgc
gccgagttcaatttggtctggctcgatatggaaatgaccggcttgcagcccgacagcgac
cggatcatcgaagttgcggtggtcgtgaccgattcggcgctcacgcggcgcatcgaaggg
ccggtattcgccattcatcagtcggacgccgtgctcgatggcatggacgactggaacaag
tcgactcacggccgctcgggcctgatcgatcgcgtgaaggcatcgaccatcgacgaagcg
tcggccgaagtccaactgatcgagttcctgtcccggtacgtgccgccgaacaagtcgccg
atgtgcggcaactccatctgccaggatcgtcgcttcatggcgcgttacatgcccaggctc
gaggccttcttccattaccggaacctggacgtcagcacgctcaaggagctgtgccgccgc
tgggaaccgacggtctacaagggcttcaccaagcgggccgcccacacggcgctggccgac
atccacgaatccatcgacgaactggtctattaccgcgagcacttcctgaagactgccgtg
cccggcgccccggatgttccggtggccaacccggactga

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