Pandoraea pnomenusa 3kgm: U875_21990
Help
Entry
U875_21990 CDS
T02936
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk03420
Nucleotide excision repair
ppk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
U875_21990
03430 Mismatch repair
U875_21990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppk03400
]
U875_21990
Enzymes [BR:
ppk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U875_21990
DNA repair and recombination proteins [BR:
ppk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U875_21990
MMR (mismatch excision repair)
Other MMR factors
U875_21990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AHB07701
LinkDB
All DBs
Position
complement(4775467..4777569)
Genome browser
AA seq
700 aa
AA seq
DB search
MSSQPTEPTQRHVSAGDPWADLNDRQREAVDYGVGDDGSPGGPLLVIAGAGSGKTSTLAH
RVANLIVRGADPNRILLLTFSRRAAGEMERRVGAVLQKVLGLASSQPPSLPWAGTFHAVG
ARLLRDFAPRIGLSEAFTIHDRSDAEDLLGLVRHDLGFSATQSRFPLKGTCLSIYSRVVN
SQAPLAEVLAKYFPWCAQWEAQLKALFGAYVDAKQSQQVLDYDDLLLYWAETMGEPALAR
ELDARFDHVLVDEYQDTNRLQAQILLAMKPEGRGLTVVGDDAQSIYAFRAATIRNILDFP
GQFAMPAHVVTLERNYRSTQPILDASNAVIAESSERYAKALWTDRQSTRLPQLVNVSDES
GQARWVADQVLAQRETGTRLMQQAVLFRTGSHSAALELELTRRNIPFVKFGGLKFLEAAH
VKDLLSILRWAHNPASRLSGFRVAQLIPGIGPVSATRLLDAMAQSATPAQVLAQFKPPSS
AAADWRAFVDVYMTLHDTGLAWPADVDLALRWYGPLLTQRFDDAAVRQADLEQLARIANT
YGSREQFLTELTLDPPDATSAQSGAPMLDEDYLILSTIHSAKGQEWHSVYVLNVVDGCIP
SDMSTGDDEDIEEERRLLYVAMTRARESLQLVVPQRFYVHQQTGLGDRHVYGTRSRFVPD
GMLPLYEIFPKPREDDAPRTPVGDVTVHIDVARKLRNAWS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcagccaaccgagccaacccagcgacacgttagcgctggcgatccctgggcc
gatctcaacgaccgacagcgcgaagccgtcgactacggtgtgggcgacgacggctcgccc
ggcgggccgctgctcgtcattgcgggtgcgggatcgggcaagacgagcaccctcgcgcat
cgcgtcgccaatctgatcgtgcgcggggcggatcccaaccgcatactgctgctgacattt
tcgcgccgggccgccggggagatggagcggcgcgtgggcgcggtgctgcagaaggtgctg
ggactcgcgtcgtctcaaccgccgtcgctgccgtgggcgggaacgttccacgcggtgggc
gcccggctgctgcgcgatttcgcccctcgcatcggcctgtcggaggccttcacgatccac
gatcgcagcgatgccgaggacctgctcggtctcgttcgccacgacctcggcttttccgcc
acccagtcgcgcttccccctcaaaggcacgtgtctgtcgatctattcgcgcgtggtgaac
agtcaggcgccgcttgccgaggtgctcgcgaagtattttccgtggtgcgcgcaatgggag
gcgcaactcaaggcgctgttcggcgcctatgtcgacgccaagcagtcgcagcaggtgctc
gattacgacgacttgctgctttactgggccgagacgatgggcgagccggcactcgcgcgc
gagctcgatgcccgtttcgatcatgtgctcgtcgacgaataccaggacaccaaccggttg
caggcgcagattctgctcgcgatgaagcccgaggggcgtggcctgaccgtcgtcggtgac
gatgcgcagtcgatctacgcgtttcgcgcggccaccattcgcaacatcctcgacttcccc
gggcagttcgccatgcccgcgcacgtggtgacgctggagcgcaattaccggtcgacgcaa
ccgattctcgacgcgtccaatgccgtcatcgccgagtcgagcgagcgctatgcgaaggcg
ctgtggacggaccgccagtcgacgcggctgccgcagctcgtgaacgtgagcgacgaatcg
gggcaggcgcgatgggtcgccgatcaggtgctggcgcaacgcgagacgggcacacgcctg
atgcagcaagccgtgctgtttcgcaccggcagccacagcgccgcgctggagctggagctc
acgcgtcgcaatatccctttcgtgaaattcggcggactgaagtttctcgaggccgcgcac
gtcaaggacctgctgtcgatactgcgctgggcgcacaatccggcaagccgcttgtcgggc
ttccgcgtggcgcagttgatcccgggtatcggcccggtgagcgccacgcgtctgctcgac
gcgatggcccaatccgccacaccggcccaggtgctcgcgcagttcaagcccccgtcgtcg
gcggccgccgactggcgtgcgttcgtcgacgtctacatgacgctgcacgacacgggtctg
gcatggccggccgacgtcgatctcgccctgcgctggtacggcccgctgctcacgcaacgg
ttcgacgacgccgccgtgcgtcaggccgatctcgaacagctcgcgcgcatcgccaatact
tacggctcgcgcgaacagttcctgaccgaactcaccctcgacccaccggatgccacgagc
gcgcaatcgggcgcgccgatgctcgacgaggattacctgatcctgtcgacgatccacagc
gcgaagggacaggagtggcattcggtctacgtgctcaacgtggtcgacgggtgcattccg
tccgacatgagcacgggagacgacgaggacatcgaggaagagcggcggttgctatacgtg
gcgatgacccgcgcgagggagtcgctgcaactggtcgtgccgcagcgcttttacgtgcat
cagcaaacgggactcggcgaccggcacgtctatggcacgcgaagccgtttcgtgccggac
ggcatgctgccgctgtacgaaatctttccgaagccgagagaggacgacgcgccccgcacg
ccggtgggcgacgtgacggttcacatcgatgtcgcgaggaaactgcgtaatgcctggtcc
tga
DBGET
integrated database retrieval system
