KEGG   Paenibacillus polymyxa SC2: PPSC2_00040
Entry
PPSC2_00040       CDS       T01335                                 
Symbol
gyrA1
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
ppm  Paenibacillus polymyxa SC2
Brite
KEGG Orthology (KO) [BR:ppm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppm03032]
    PPSC2_00040 (gyrA1)
   03400 DNA repair and recombination proteins [BR:ppm03400]
    PPSC2_00040 (gyrA1)
Enzymes [BR:ppm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     PPSC2_00040 (gyrA1)
DNA replication proteins [BR:ppm03032]
 Prokaryotic type
  DNA Topoisomerases
   PPSC2_00040 (gyrA1)
DNA repair and recombination proteins [BR:ppm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      PPSC2_00040 (gyrA1)
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C NTase_sub_bind
Other DBs
NCBI-ProteinID: ADO53996
UniProt: E3EDT0
LinkDB
Position
7773..10337
AA seq 854 aa
MADQNNSQIINRDIGVEMRESFMDYAMSIIVSRALPDVRDGLKPVHRRILYAMSELGMSP
DKPYKKSARIVGEVIGKYHPHGDTAVYDTMVRMAQDFSLRYMLVDGHGNFGSVDGDMAAA
MRYTEARLSKIAMEMLRDLNKETVDFMPNYDGEENEPVVLPARYPNLLVNGVGGIAVGMA
TNIPPHNLGEVIDGVQALIENPDITPMELMDYIQGPDFPTAGYILGRSGIRQAYQTGRGS
VTMRAKTTIEEIGNKARIIVHELPYQVNKARLVEKIAELVRDKRIEGITDLRDESDRTGM
RIVIELRRDVNPNVVLNNLFKHTAMQSNFGINMLAIVNNEPKILNLKDVLYYYLKHQIEV
IRRRTEFDLKKAEARAHILEGLRIALDHLDEVISLIRSSQTAEAAREGLIERFSLTLEQA
QAILDMRLQRLTGLEREKIENEYNELIQKIMEYREILANEHLVLNIISEELNELKGRFAD
DRRTEITVGEESILDEDLIPREDVIITVTHTGYIKRLPVTTYRSQKRGGRGVVGMDTKDE
DFVEHLFITNSHHHLLFFTDKGKVYRIKAYEIPDLSRTARGTPIINLIQIEQGESINAVI
PIEEFVEDSYLFFATQHGIIKKTPLDDYANIRKGGLIAINLREDDALIEVKLTDGQQEMI
IGTAQGMSIRFPESDVRSMGRSATGVKGISLDESDAVIGMDIVNTDLDILIVTAKGYGKR
TPAVDYRIQSRGGKGIKTINVTDKNGPVVGLKVVKAEEDLMIITASGTLIRTSMGEISTM
GRNTQGVRLINIRDDDSVATVCRANKNEEQDELLEDLLEDGGTGEEPTLSSAEPTLEVNT
EDTEGNDSESSEDE
NT seq 2565 nt   +upstreamnt  +downstreamnt
atggcggatcaaaataactcgcaaatcatcaatagggatatcggagtggaaatgcgcgaa
tcctttatggattatgccatgagtattattgttagccgtgccttgcctgatgtgcgggac
ggactgaagccggtacaccgtcgtattttgtacgcgatgtccgagctaggcatgtcgcca
gataagccttataaaaaatcagcaagaatcgtcggtgaagttatcggtaagtaccaccct
catggtgatacggctgtgtatgatacgatggtgcggatggcgcaggatttttccttgcgt
tatatgttggtggatggacacggtaactttggctccgtggatggagatatggcagcagca
atgcgttacactgaagcacggctgtccaagatagccatggaaatgctccgtgatttgaac
aaagagaccgttgattttatgcctaactacgatggtgaagagaacgagcctgtcgtattg
cctgcacgttatcctaacttgctggttaacggtgtcggcgggattgcagttggtatggca
accaatattcctccgcataacttgggagaggttatcgatggtgtacaagcgctgatcgaa
aaccctgacattacgccgatggaacttatggattacattcaagggccggatttcccgaca
gcaggttatatcttaggtcgctcaggcattcgccaggcgtatcagactggccgcggatct
gtgaccatgcgtgcgaagaccaccatagaagagattggcaataaagcacggattatcgtg
catgaactgccttaccaagtgaacaaggctcgtctggtcgagaaaattgctgaattagta
cgtgacaagcgtattgaaggcattacggatcttcgagatgaatccgaccgtacgggtatg
cgtatcgttatcgagttgcgtagagatgtgaacccgaacgtcgttctgaataatttgttt
aaacatacagccatgcagtccaattttggtatcaatatgcttgcgattgtaaacaatgag
ccgaagattttgaacctgaaagatgtcttgtattattatctcaagcatcagattgaggtt
attcgtcgtcggacagaattcgatctgaaaaaagccgaagctagagcacacattctggaa
ggcttgcgtattgctcttgaccatctggacgaagttatttccttgattcgttcttcccaa
actgcagaagcagcccgtgaaggactgattgagcgtttctcgctgactcttgagcaggct
caggctattctcgatatgcgtctgcaacgcttaaccggtttggaacgtgagaagatcgag
aacgaatataacgagctaattcaaaagataatggaataccgtgaaattttggcgaatgag
catctggtactcaacatcattagtgaagagctgaatgagctgaaaggacgcttcgccgat
gatcgtcgcactgaaattacagtgggtgaagaaagtattcttgatgaggatctcattccg
cgtgaagacgttattattactgtaacccatactggatatatcaaacgccttcctgttact
acgtatcgcagtcaaaaacgcggtggtcgtggtgtagtaggtatggataccaaagatgag
gacttcgtagagcatctgttcattacgaattcacatcatcatttgttattctttacggac
aagggcaaggtataccggattaaggcttatgagattccagacttaagccggacagctcgg
gggacaccgattattaacctgattcagattgaacagggtgagtcgatcaatgcggtaatt
ccaattgaggaatttgtggaggacagttatctattctttgcgacccaacatgggattatt
aagaaaacacctcttgatgactatgcgaatatccgcaaaggcggcctgattgccattaac
ttgcgcgaagatgacgccctgatcgaagtgaagctgactgatggacagcaggaaatgatt
atcggcacagcacaagggatgtctatccgtttccctgaaagtgatgtacgatctatggga
cgtagtgctacaggagttaaagggattagtcttgatgaaagtgatgctgtaatcggcatg
gatatcgtcaataccgacctggatattctgatcgtaacagccaagggttatggcaaacgt
acccctgctgtggattatcgtatccagagccgtgggggcaaggggatcaagacgattaac
gttaccgataaaaatggtccagttgtcggcctcaaggttgtaaaagccgaagaggacttg
atgattattacagctagtggcaccttgatccggactagcatgggggaaatctccacgatg
ggtcggaatacgcaaggggtaagactgattaatattcgcgatgatgattcggttgcaacg
gtttgtcgtgcgaacaagaatgaggagcaagatgaactgcttgaggatttattagaggat
ggaggaactggtgaggagccaactctatcatctgctgaaccaactcttgaagtgaataca
gaagatacggaaggtaacgattcagaatcttctgaggacgaataa

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