Paenibacillus polymyxa SC2: PPSC2_00905
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Entry
PPSC2_00905 CDS
T01335
Symbol
yvcJ
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
KO
K06958
RNase adapter protein RapZ
Organism
ppm
Paenibacillus polymyxa SC2
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppm03019
]
PPSC2_00905 (yvcJ)
Messenger RNA biogenesis [BR:
ppm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PPSC2_00905 (yvcJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_2
AAA_18
AAA_22
AAA_28
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ADO54164
UniProt:
E3EGD6
LinkDB
All DBs
Position
207004..207903
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AA seq
299 aa
AA seq
DB search
MTDNLKNAAPWATLIIITGMSGAGKTIAVQSLEDLGFFCVDNLPPVLIPKFAELIEQSNG
KIGKVALVIDLRGREFFTALSESLNYIKDHFTIHCEILFLNANDGVLVQRYKESRRRHPL
APDGMPLDGIRLERKMLEELKSSATQVIDTSTMKPATLKARIISRFSHLESSMLSVNITS
FGFKYGIPIDADLVFDVRFLPNPHYVDQLRPHTGQDSDVYDYVMKWPETQAFLTKLLDML
HFLIPQYRKEGKSQVIIGIGCTGGKHRSVAISEYLGKMLGASETESVSVSHRDADRDRH
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaatctaaaaaatgctgcgccgtgggcaacgctcattattattacggggatg
tcaggcgcagggaagaccattgcggtgcagagccttgaagacttgggcttcttctgcgtt
gataatttaccccctgtgctgattcccaaatttgccgagttgattgagcagtctaacggt
aaaataggcaaagtggctcttgtcattgatttacgcggacgagaatttttcaccgccttg
tcggaatcgcttaattatattaaagatcattttacgattcattgtgaaattttattcttg
aatgcgaatgacggtgttctcgtacagcggtacaaagaaagccgtcgacggcatccgctt
gctccagatggtatgcctttggatgggattcgtttggagcgtaagatgttggaggaactc
aaaagctccgctacacaggttattgatacaagtacgatgaagcccgcaaccttaaaggcg
aggattatttcgagattttctcatctggagagcagtatgctgtccgtgaatattacttct
tttggcttcaaatatggtattcccattgatgccgatcttgtattcgatgtgcgcttcctg
cctaatccccactatgtggaccagctacgtccacacacgggacaggatagcgatgtatat
gattatgtcatgaagtggccggagactcaggcgttcctgaccaagttgctggatatgttg
cactttttgattccgcagtatcgcaaagaaggtaaaagccaggtcattatcggtattggc
tgtactggaggtaagcatcgttcagttgcaatatcggagtatttaggaaaaatgctgggt
gccagcgagacagaatccgtttctgtttcgcatcgggatgctgatcgggaccggcattaa
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