KEGG   Paenibacillus polymyxa SC2: PPSC2_12130Help
Entry
PPSC2_12130       CDS       T01335                                 

Gene name
ddlB
Definition
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
ppm  Paenibacillus polymyxa SC2
Pathway
ppm00473  D-Alanine metabolism
ppm00550  Peptidoglycan biosynthesis
ppm01100  Metabolic pathways
ppm01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:ppm00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    PPSC2_12130 (ddlB)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PPSC2_12130 (ddlB)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    PPSC2_12130 (ddlB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppm01011]
    PPSC2_12130 (ddlB)
Enzymes [BR:ppm01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     PPSC2_12130 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:ppm01011]
 Precursor biosynthesis
  Amino acid ligase
   PPSC2_12130 (ddlB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 RimK CPSase_L_D2 ATP-grasp_4 ATP-grasp GARS_A ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID: ADO56550
UniProt: E3EJK0
LinkDB All DBs
Position
2681770..2682687
Genome map
AA seq 305 aa AA seqDB search
MKIGVIMGGTSTEREVSLQTGQEMLNHLDRSRYEVVPIVIDQPADLIAQVQHTGIDFALL
ALHGQYGEDGTVQGALETLGIPYTGSGVLASSLCMNKQLSKMLLKSAGVLTPAGLCWQGM
GDYDQQAVEQLGYPVIVKPNMGGSSIGIQLVHNEKELHSAIQKACALDQTILVEPFIQGT
ELTCSIVDGEVLPIIRIRSAHSEWFDYKAKYETGGAEEKVIQLPPVIEQRVRETALASYR
LLQCKVYARIDMILCQDVPYVLEVNTLPGMTANSLLPKSAAAAGITFTQLLDRIITSSLH
ERKRE
NT seq 918 nt NT seq  +upstreamnt  +downstreamnt
atgaagattggcgttattatggggggtacttccactgagcgtgaggtttctctgcagaca
ggtcaagagatgctgaatcatttggatcgcagccgctatgaggtggttccaattgtgatc
gatcagccagcggatttaatcgcacaggttcagcacacaggcatcgattttgcgttgttg
gcgctgcatggccaatatggcgaggatggcacggtgcagggagcgctggagacactgggc
attccctatacagggagcggtgttctggcaagcagcctgtgcatgaataagcagctgtcc
aagatgctgctgaagtcggcaggggtgcttacgcctgcaggcctctgctggcagggaatg
ggcgattatgatcagcaagcggtagagcagttgggttatcccgttattgtgaagccgaat
atgggaggatccagcatcggcatccagcttgtgcataatgagaaggagcttcactcggct
attcagaaggcttgtgctttggatcagacgattttggttgagccttttattcaagggacg
gagcttacctgctcaattgtggatggcgaggtattaccgattatcaggattcgctctgcc
cattctgaatggttcgactataaagcgaaatatgagaccggcggtgctgaggagaaggtg
atccagcttcctcccgttattgagcagcgtgtgcgcgagacggcgcttgccagctatcgg
ctgctgcagtgcaaggtgtatgcaaggatcgatatgattttgtgccaggatgtaccttac
gttttggaggtaaacaccttacccggaatgaccgctaacagcctacttccgaagagtgca
gctgcagcaggcataacctttacgcagctgctggaccgtattattactagctcacttcat
gagcgaaaaagggaatga

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