Paenibacillus polymyxa SC2: PPSC2_12910
Help
Entry
PPSC2_12910 CDS
T01335
Symbol
rafA
Name
(GenBank) alpha-galactosidase
KO
K07407
alpha-galactosidase [EC:
3.2.1.22
]
Organism
ppm
Paenibacillus polymyxa SC2
Pathway
ppm00052
Galactose metabolism
ppm00561
Glycerolipid metabolism
ppm00600
Sphingolipid metabolism
ppm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
PPSC2_12910 (rafA)
09103 Lipid metabolism
00561 Glycerolipid metabolism
PPSC2_12910 (rafA)
00600 Sphingolipid metabolism
PPSC2_12910 (rafA)
Enzymes [BR:
ppm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.22 alpha-galactosidase
PPSC2_12910 (rafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Melibiase
Glyco_hydro_36N
Glyco_hydro_36C
Melibiase_2
Motif
Other DBs
NCBI-ProteinID:
ADO56725
UniProt:
E3E640
LinkDB
All DBs
Position
2926708..2928942
Genome browser
AA seq
744 aa
AA seq
DB search
MASIQVNPKERTFHLTNKYCSYLFRVMENGQLEHLYYGKKMEYLGQYDRFIERSYRSVSV
GEFDGDLVTSLESIKQEFPSSGSGDFREPAVEIIQEDGSHVMEFIFDRYEVITEKPKIPH
LPATFCNEADEAETLLITLTDSLTGAVAVLAYTIFSELPVITRSVSITNSGNSVLRVNRL
MSMSLDLPDSEYEIIHLSGAWGRERHVERTPLRPGVQSIGSTRGISSHIHNPFLALAKPG
SQEHQGEIYAVNLVYSGNFLAQAEVDSYSTTRLSLGIHPDKFCWTLNPGECFYSPEAVMV
YSQSGLNGMSQAFHRLYNKHLIRSSWAERERPVLINNWEGTYFDFTEKKIVDMAKKASEL
GIELFVLDDGWFGQRNNDTSSLGDWFENREKLPNGISNLAKKINELGMKFGLWFEPEMVN
SDSHIMREHPDWVVGTPGRKRKHGRHQYVLDYSQPPVVDYLFKLMDDVLSSAHIEYVKWD
MNRCISEAYSLSLGKERQGEFFHRYVLGVYALYEKLITKYPEVLFESCASGGGRFDPGML
YYAPQTWTSDDSEAIERLKIQYGTSMAYPLSSMGAHVSTIPNHQVGRTAPLQTRSNVAYF
GVFGYELDPLALTEEECNIIKKQIQLYKRHQRLVTQGTFYRLLSPFEKNETAWMTVDAER
EHALVGWYQVLSRPNAAYSRLKLIGLDEMAVYFVEELDRRFTGSELMNIGLILTPPYKAD
QDFNIAEKYDFSSQLFTLTKETSS
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggctagtatacaagttaacccaaaggaacgtacatttcacttaacgaacaaatactgc
agttaccttttccgtgtcatggagaacgggcaattggagcatttgtattatggcaaaaaa
atggagtacctaggtcaatatgaccgttttattgaacgaagctaccgctctgtgtctgtc
ggtgagtttgatggtgacttggtaacatcattggaaagcatcaagcaggaatttccttct
tcgggaagtggagactttagagaaccagcagttgagatcatacaggaggacggttctcat
gtcatggagttcatctttgaccgttacgaggtcatcacggagaaacctaaaatcccccat
ctccctgctacgttttgtaatgaagcagatgaagcagagacactcctgatcacgctgacc
gattcccttacaggagcggttgccgtgcttgcatacaccatcttcagtgaactgcctgta
atcacgcgatccgtatccataacgaattccggaaatagtgttctgagagtcaaccgtcta
atgagcatgagccttgatcttcctgactccgaatatgaaattattcatttgtcgggggca
tggggtagggaacgacatgtggagcgtacaccactcagaccaggtgttcagtccattggg
agcacacgaggaattagtagtcatattcacaatccattcttggcgcttgccaaaccggga
tctcaggaacaccaaggagaaatatatgcagtgaatcttgtctacagcggaaactttctt
gcccaggcggaagtggacagctactcaactacccgactgagcctcggtattcatcctgac
aaattctgctggactctgaatcctggagaatgtttttattcgcctgaagcagttatggtc
tactcacagagcggtttgaacggcatgagccaggcgttccatcgcctgtacaataaacac
ttaattcgtagtagctgggctgaacgggaacgacctgtattgatcaataactgggagggt
acctactttgattttaccgaaaagaaaatagtggatatggctaaaaaagcaagtgaacta
gggattgagctctttgtcttggatgacggttggttcggtcaaagaaacaatgatacctcc
tcactcggtgactggtttgaaaatcgtgaaaagctaccgaacggaatctcaaatttggca
aagaagatcaatgagcttggtatgaaattcggtctttggtttgagccggaaatggttaac
tccgactctcatattatgagggaacatccggattgggttgtgggaacacccgggcgtaaa
cgcaagcatggacggcatcagtatgttcttgattattcccaaccgcctgttgtggattac
ctgtttaagttaatggatgacgtgctctcttctgctcatatcgaatatgtaaaatgggat
atgaatcgctgcatttcagaagcctattcattatctctgggcaaggaaagacagggcgag
tttttccatcgttacgtcctaggcgtgtatgctttatatgagaagctgattaccaaatac
cctgaggttttgtttgagtcctgtgcttccggtggaggacgatttgatccagggatgctt
tattatgctccgcaaacatggacgagcgacgatagcgaagctattgaacgtcttaagatt
cagtatggcacttccatggcctatccgcttagcagcatgggtgctcatgtgtcaaccatt
ccgaaccaccaggtaggcagaaccgcaccgctgcaaaccagatcaaatgtcgcctacttc
ggtgtattcggttacgaacttgatccattagctttaaccgaggaagagtgcaatataatc
aaaaagcaaatacaactgtataaacgtcaccaacgattagttacccagggaacgttttac
cgtctgctaagtccctttgaaaaaaatgagacagcttggatgaccgttgatgcagaacgt
gagcatgctctcgtcggctggtaccaggtactctcacgccctaatgcagcttattcacgg
ctaaagctcatcggactggacgaaatggcagtatatttcgtggaagaactggatcgacgt
ttcacaggcagcgagttaatgaacatcggacttatactcaccccgccttataaggctgac
caggatttcaatattgcggagaaatatgatttctcatctcaattatttactctaactaaa
gagacttcctcgtga
DBGET
integrated database retrieval system
