Paenibacillus polymyxa SC2: PPSC2_15350
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Entry
PPSC2_15350 CDS
T01335
Symbol
pdpF1
Name
(GenBank) carboxypeptidase
KO
K03693
penicillin-binding protein 1B
Organism
ppm
Paenibacillus polymyxa SC2
Pathway
ppm00550
Peptidoglycan biosynthesis
ppm01100
Metabolic pathways
ppm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PPSC2_15350 (pdpF1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PPSC2_15350 (pdpF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ppm01003
]
PPSC2_15350 (pdpF1)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppm01011
]
PPSC2_15350 (pdpF1)
Glycosyltransferases [BR:
ppm01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
PPSC2_15350 (pdpF1)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppm01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
PPSC2_15350 (pdpF1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
ADO57239
UniProt:
E3E531
LinkDB
All DBs
Position
complement(3448814..3451339)
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AA seq
841 aa
AA seq
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MNPKRRPSSQKRSRWRIFGRVLLINIKWFSLAGVLGVLFAGGLISGYVAALVHDEPVRSR
QLIYEKVNENALTSFVFFNDQVTPVGRMRMEEDRQLVDLKDVPQSIVDALISTEDSQFYE
HHGVDLKGTARAVKQKLLNENRQTGGSTLTQQVARRVFLSLDKTDSRKVKEMLLALRMER
FMGKDKILTAYLNKMPFGNGSAGYNLYGIKSASLGIFNVSDLHKLHIAQAAYLAGLPQLP
SVYSAFDGKGNFDEEGFNKAMERQRVVLERMLATGKLTLSEYNEALQFDVRATLAPHREK
SYNTFPYLMLETEREAAQLLALQQNPNLTAAEISKPEHAELLQNTREELQRSGYRIYTTI
NKKIYSNMRQIAANPQNFSPYSKKKGLEQIAAIMIDHKTGAILGMIEGRDFNTEQMNYAT
QMTRQPGSAMKPIAAYLPALEKGYTQPAGLIDDSQIILKDGRKGYHIPKNYNRRYEGLMT
AREALNRSINIPALRLFLYEVKIPNAWNFVRSLGITTIQPQDEHAQTGVLGGLSKGVSVE
ELTAAYGTIPNMGVYNAPHLISKITDANGKIVYEFKPQTKRVYSQQTAFLMTDMLRTVIS
DPRGTGKRLQKAFKSYGTIDIAGKTGTTQNFGDVWFMGYTPDVTLGVWAGYRQQVNTLSQ
EGHTRAQSVWALIMNEAVKDQPELFKHKHFIQPEGVVKVTVSSLTGKLPGRYSRQSGHLV
TDWFNQKYVPTEVGREQLPRSARPVVPSKPEVKKEDVPEVKVPATDQEEVPPEETAPAVP
DTDAEIEPLDENNDVPSTDTSQPSIENEPETPSESENQSGAPKTQPDEVIYPEPTVDQSN
N
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaacccaaaacgtcgaccatcatctcaaaaacgcagtaggtggcgcatttttggcaga
gttttgctgattaatatcaagtggttctcgcttgcgggtgtacttggagtgttgtttgcc
ggaggtcttatatccggttatgtggcggcactggttcatgatgaacctgtacgatcacgt
caattgatatatgaaaaggtaaatgagaatgctctgaccagctttgtattttttaatgat
caggtaactccggttggaagaatgcgcatggaggaggaccgacagctcgttgacctgaag
gatgttcctcagtccattgtggatgccctcatttcaacggaagacagccaattttatgag
caccatggtgtagatttaaaggggacggctcgtgctgtcaagcagaagcttttgaatgaa
aaccgccaaactggcggcagtacactgacacagcaggtagcccgaagagttttcctgagt
ctggataaaacggacagccgaaaggtgaaggaaatgctgctggcactacgtatggagcgt
tttatgggcaaagacaaaatattaacggcttacttaaataaaatgccttttggtaatggt
tccgctggttacaatttgtatggaatcaagtctgcttcgttagggattttcaatgtaagc
gacctacataagcttcatattgctcaagcggcttatttggcaggtcttccacagctgcca
tctgtttattccgcttttgatggtaaagggaattttgatgaagaaggtttcaataaagcg
atggagcgccaacgcgttgtgttggaaagaatgctggcaacaggcaagctcacgctgtcc
gaatataacgaggcgcttcaatttgatgtgagagcgacccttgccccacatcgcgaaaaa
agctataatacattcccttatttgatgctggaaacagagcgggaggccgcacagttgtta
gcactccagcaaaatccgaatctcacagcagccgagatttctaagcctgagcatgctgaa
cttcttcaaaatacgcgagaagagttgcaacgatccggctatcgaatttatacaacaata
aataaaaaaatttatagcaatatgcggcagattgcagccaatccacaaaatttttctcca
tacagtaagaagaaggggctagaacagattgcagcaatcatgattgatcataagacaggg
gctatcctcggtatgatcgagggccgggattttaataccgagcaaatgaactatgcaact
caaatgacacgtcagcccggttctgccatgaagcctattgctgcttacttacctgctttg
gagaagggctacactcagcccgccggtcttattgatgattcacaaatcatattgaaagac
ggacgtaagggttatcatattcctaaaaattataacagaaggtatgaggggcttatgaca
gcccgtgaagcactcaatcggtcaatcaacatccctgcactgaggctgtttttatatgaa
gttaaaattccaaacgcttggaattttgtgcgttctcttggaattacaacgattcaacca
caggatgaacatgctcaaacaggagttctaggtggacttagtaagggggtatccgtcgaa
gaactgaccgcagcatatgggacaattcccaatatgggcgtgtataatgcccctcacttg
atcagtaaaattacagatgccaacggtaagattgtatatgaatttaaaccacagacaaag
cgtgtatattcgcagcaaaccgcatttttgatgacggatatgctcagaaccgttatatca
gacccgagaggaactggcaaacgtctgcaaaaagcttttaaaagctacggtaccattgat
atcgcgggtaaaacgggtacgacacagaactttggtgatgtgtggtttatgggatacaca
cctgacgttacgctaggcgtctgggctggttatcgccaacaggttaatacattatctcaa
gaaggtcacaccagagcacagtcggtgtgggcgctgatcatgaatgaggcggtcaaggac
cagcctgagctttttaagcataagcattttatacagccggaaggcgttgtgaaagttacg
gtatctagtcttacaggtaagctgccagggcgttattcccgccaatcaggtcatctcgtg
acggactggtttaaccaaaagtacgtgccgaccgaagtcggaagagaacagcttccacgt
tctgctagaccagtagttccgtccaaaccagaggtcaagaaagaagatgtccctgaggtt
aaggtgcctgcaacagatcaagaggaggttccaccagaggaaacagctcctgctgttcct
gacacagatgcagagatcgaaccgcttgatgagaataacgatgtgccatcaacagataca
tcgcaaccttctattgaaaacgaaccggagacaccttctgaatcagagaaccagagtggt
gctccaaaaactcagcctgacgaggttatctatcctgaaccaacggttgatcaatccaac
aactaa
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