KEGG   Paenibacillus polymyxa SC2: PPSC2_25220
Entry
PPSC2_25220       CDS       T01335                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
ppm  Paenibacillus polymyxa SC2
Pathway
ppm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ppm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PPSC2_25220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppm03400]
    PPSC2_25220
Enzymes [BR:ppm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     PPSC2_25220
DNA repair and recombination proteins [BR:ppm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     PPSC2_25220
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ADO59328
UniProt: E3EB48
LinkDB
Position
complement(5663141..5663734)
AA seq 197 aa
MDHPYVILPEEQAPDGIEHCEICELSKQRNRVIWGEGNPKAPLMMILDNPGAREDREGNS
FLCGTRETLQYGMREAGIDVNDVYVTYLLKCRPMRAYNKPEARAACLPHLQIQLFQKQPL
VLFGFGNVVAGAIFTNKEGASVKELRGSWYELQGTPISFTYHPLAVRRRANLLRFFVEDL
KALKEKWKEIQLKQDID
NT seq 594 nt   +upstreamnt  +downstreamnt
atggatcatccctatgtaattttacctgaagaacaagcacccgatggtatagagcattgt
gaaatttgcgagctatccaagcagcggaatcgtgtcatctggggtgaaggaaatccgaaa
gctccacttatgatgattctggataatcccggagcccgggaggatcgggaaggaaattcg
tttttatgcggtacccgagaaacactacaatacggcatgagagaggctgggatagacgta
aatgatgtttatgtcacctatttgctaaaatgccgaccgatgcgtgcctataataaaccc
gaggctagagcggcgtgtctccctcatctacagatacagctttttcagaagcagccgctt
gtattatttggatttggtaatgtcgtagcgggagccatatttacaaataaggagggtgcc
agtgtcaaggagttacgaggcagctggtatgagttgcagggtacgcccatcagcttcacc
tatcacccgcttgcagtaagaagacgagccaatttacttaggttcttcgtagaagattta
aaagctttgaaggagaagtggaaagagattcagctcaagcaggatatagattga

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