Paenibacillus polymyxa SC2: PPSC2_25220
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Entry
PPSC2_25220 CDS
T01335
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppm
Paenibacillus polymyxa SC2
Pathway
ppm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PPSC2_25220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppm03400
]
PPSC2_25220
Enzymes [BR:
ppm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PPSC2_25220
DNA repair and recombination proteins [BR:
ppm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PPSC2_25220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADO59328
UniProt:
E3EB48
LinkDB
All DBs
Position
complement(5663141..5663734)
Genome browser
AA seq
197 aa
AA seq
DB search
MDHPYVILPEEQAPDGIEHCEICELSKQRNRVIWGEGNPKAPLMMILDNPGAREDREGNS
FLCGTRETLQYGMREAGIDVNDVYVTYLLKCRPMRAYNKPEARAACLPHLQIQLFQKQPL
VLFGFGNVVAGAIFTNKEGASVKELRGSWYELQGTPISFTYHPLAVRRRANLLRFFVEDL
KALKEKWKEIQLKQDID
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggatcatccctatgtaattttacctgaagaacaagcacccgatggtatagagcattgt
gaaatttgcgagctatccaagcagcggaatcgtgtcatctggggtgaaggaaatccgaaa
gctccacttatgatgattctggataatcccggagcccgggaggatcgggaaggaaattcg
tttttatgcggtacccgagaaacactacaatacggcatgagagaggctgggatagacgta
aatgatgtttatgtcacctatttgctaaaatgccgaccgatgcgtgcctataataaaccc
gaggctagagcggcgtgtctccctcatctacagatacagctttttcagaagcagccgctt
gtattatttggatttggtaatgtcgtagcgggagccatatttacaaataaggagggtgcc
agtgtcaaggagttacgaggcagctggtatgagttgcagggtacgcccatcagcttcacc
tatcacccgcttgcagtaagaagacgagccaatttacttaggttcttcgtagaagattta
aaagctttgaaggagaagtggaaagagattcagctcaagcaggatatagattga
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