Pandoraea pnomenusa DSM 16536: LV28_08475
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Entry
LV28_08475 CDS
T03411
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppnm03019
]
LV28_08475
03009 Ribosome biogenesis [BR:
ppnm03009
]
LV28_08475
Messenger RNA biogenesis [BR:
ppnm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LV28_08475
Ribosome biogenesis [BR:
ppnm03009
]
Prokaryotic type
rRNA processing factors
LV28_08475
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AIU26571
UniProt:
A0A378YIA5
LinkDB
All DBs
Position
complement(1290867..1292336)
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AA seq
489 aa
AA seq
DB search
MNEDILVNITPQETRVALMQLGAVQELHIERTLSRGLVGNIYLGKVVRVLPGMQSAFIDI
GLERAAFLHVADIWHPRTNNDTSTPHPQPPIEKTVFEGQTLMVQVIKDPIGTKGARLSTQ
ISIAGRTLVYLPQEPHIGISQRIESEAEREALRSKIQALVPADEKGGFIVRTIAEDAADA
ELANDIAYLRKSWQTIGEQSTRVPAPALLYQDLNLAQRVLRDFVHEETGKILVDSRETFQ
KLAEFAATYTPAVLGKLTHYTGERPLFDLYNVETEIERALSRRVDLKSGGYLMIDQTEAM
TTIDVNTGGYVGARNFDDTIFKTNLEAALMIARQLRLRNLGGIIIIDFIDMESAEHRDSV
LAELKKALARDRTRITVNGFSQLGLVEMTRKRTRESLAHVLCEPCAVCQGKGQVKTPRTL
CYDILREILRESRQFNPREFRLIASQEVVDLFLEEESQHLAMLIDFIGKPISLQVESTFH
QEQYDIILM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagacattctggtcaacatcacgccacaggaaacccgtgtggcgctcatgcag
ctcggcgcggtgcaggaactgcacatcgagcgtacgctctcgcgagggctggtcggcaac
atctatctgggcaaggtcgtgcgcgtactgccgggcatgcaatcggcgttcatcgatatc
gggctcgagcgcgccgccttcctgcacgtggccgatatctggcacccgcgcacgaacaac
gatacgtccacgccgcacccccagccgcccatcgaaaaaacggttttcgagggccagacg
ctcatggtgcaggtcatcaaggatccgatcggcaccaagggcgctcgcctctcgacgcag
atcagcatcgccgggcgcacgctcgtctacctgccgcaggagccgcacatcggcatctcg
caacgtatcgagagcgaagccgagcgcgaagcgttgcgcagcaagatccaggcgctggtg
cccgccgacgagaaaggcggcttcatcgtgcgcacgatcgccgaagacgcggccgacgcc
gagctggccaacgacatcgcctacctgcgcaagtcgtggcagaccatcggagaacagagc
acgcgcgtgcccgcgccggcgctgctctaccaggacctgaacctggcgcagcgtgtactg
cgcgatttcgtccacgaggaaacgggcaagattctcgtcgactcgcgcgagacgtttcag
aagctggccgaattcgccgccacctacaccccggcggtgctcggcaagctgacgcactac
accggggagcgtccgctgttcgatctgtacaacgtggagacggagatcgagcgggcgctg
tcgcgtcgcgtcgacctgaagtccggcgggtacctgatgatcgatcagaccgaagcgatg
acgaccatcgatgtgaacaccggcggctacgtcggtgcgcgcaacttcgacgacacgatc
ttcaagacgaacctcgaagcggcgctgatgattgcgcgccagttgcggctgcgcaacctg
ggcgggatcatcatcatcgacttcatcgacatggaaagtgccgagcatcgcgactcggtg
cttgccgagctgaagaaggcgctcgcccgggaccgcacccgcatcaccgtgaatggcttc
tcgcaattggggctggtcgagatgacgcgcaagcgcacgcgagaatcgctcgcccacgtg
ctgtgcgagccatgtgctgtgtgccagggcaagggccaggtgaaaacgccacgtacgctg
tgctatgacatcctgcgcgaaatcctgcgcgaatcgcgccagttcaacccgcgcgagttt
cgtctgatcgcctcgcaggaagtcgtcgacctgttcctcgaagaggagtcgcagcatctg
gcgatgctcatcgacttcatcggcaagcccatctcgctgcaagtggaatcgacgttccac
caggagcagtacgacatcattctgatgtaa
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