Pandoraea pnomenusa DSM 16536: LV28_13735
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Entry
LV28_13735 CDS
T03411
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm00260
Glycine, serine and threonine metabolism
ppnm00630
Glyoxylate and dicarboxylate metabolism
ppnm00785
Lipoic acid metabolism
ppnm01100
Metabolic pathways
ppnm01110
Biosynthesis of secondary metabolites
ppnm01200
Carbon metabolism
Module
ppnm_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LV28_13735
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LV28_13735
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LV28_13735
Enzymes [BR:
ppnm01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
LV28_13735
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
FANC_SAP
Aminotran_1_2
BaxI_1
Motif
Other DBs
NCBI-ProteinID:
AIU27450
UniProt:
A0A378YN49
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All DBs
Position
165342..168269
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AA seq
975 aa
AA seq
DB search
MNALTDLQAPRRSLTELEQRENFSARHIGPDTPEQQAMLTELGYASRAALIDAVVPASIR
RDGERFAASLGQFAAAKTESQALAQLRALADQNQVFKSFIGQGYYNTFTPGVILRNVLEN
PAWYTAYTPYQPEISQGRLEALLNYQQMIIDMTGLAIANASMLDEATAAAEAMTLVKRTG
KSKSNTFFVADDVLPQTIEVVQTRAKPLGIEVQVGPVAAAAEVEAFGVLVQYPGVGGDVR
DFRALADTIHAKGGMLVAAADLLSLALLTPPGEWGADVAVGNSQRFGVPMGFGGPHAAYL
ATRDELKRSMPGRLVGVSVDSQGKPALRLALQTREQHIRREKATSNICTAQALLAIMASM
YAAYHGPQGLRVIAERVHRLTAVLAAGLAALGAAPRNATFFDTLTVPVAGRADSIHTVAA
ARRFNLRREDADTVGISLDETSTRDDVIALWEVVAEGLGKQAVSLDFDAIEATVSNGYPA
ALARQSAYLTHPVFNRYHSEHEMLRYLRSLSDKDLALDRTMIPLGSCTMKLNATSEMLPV
TWPEFGQIHPFAPADQTVGYRTMIDQLERMLVAATGYAAVSLQPNAGSQGEYAGLLIIQA
YHASRGEAHRDICLIPASAHGTNPASAQMAGMQVVVVACDANGNVDLADLQAKAEQHRDR
LAAIMMTYPSTHGVFEAGARQICEIVHANGGQVYVDGANMNAMVGLCAPGEFGGDVSHLN
LHKTFCIPHGGGGPGVGPVAVGAHLAKFLPNQRSTGYSRDAEGIGAVSGAPYGSASILPI
SWMYVAMMGAKGLTAATETAILNANYLAKKLAPHYPVLYTGPGGLVAHECILDLRPLKDT
SGITVDDVAKRLMDFGFHAPTMSFPVPGTLMVEPTESESKHELDRFIEAMVTIREEIRAV
EEGRADREDNPLKHAPHTADVVTADEWTHAYARSQAAYPVKALRERKYWPPVGRADNVYG
DRNLFCACVPMSDYE
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccttgactgacctgcaagcgccgcgccgctcgctcaccgagctcgagcagcgc
gagaacttctccgcgcgccacatcggcccggacacccccgaacaacaagccatgctcacc
gagctgggctatgcctcgcgcgccgcgttgatcgacgcggtcgtgccggcctcgatccgc
cgcgacggcgagcgcttcgccgcatcgctcggccagttcgccgccgcgaagaccgagtcg
caggcacttgcgcaattgcgcgcgctggccgaccagaaccaggtcttcaagtcgttcatc
ggtcagggctactacaacaccttcacgccgggcgtgatcctgcgcaacgtgctggagaac
ccggcctggtacacggcttacaccccgtatcagccggaaatctcgcagggccgcctcgaa
gcgctgctcaattaccagcagatgatcatcgacatgacggggctggcgatcgccaacgcg
tcgatgctcgacgaggcgaccgccgccgccgaagcgatgacgctggtcaagcgcaccggc
aagtcgaagtccaacacgttcttcgtggcggacgatgtgctgccgcaaaccatcgaagtg
gtgcaaacgcgcgccaaaccgctcggcatcgaagtccaggtcggtcccgtggccgccgcc
gccgaagtcgaggcgttcggcgtgctggtgcaatacccgggcgtgggcggcgacgtgcgc
gatttccgcgcgctggccgacacgatccatgcgaagggcggcatgctggtcgccgccgcg
gacctgctctcgctcgcgttgctcacgccgccgggcgagtggggcgccgacgttgccgtc
ggcaacagccagcgcttcggcgtgccgatgggcttcggcggcccgcacgccgcctacctg
gccacgcgcgacgaactcaagcgctcgatgcccggtcgtctggtcggcgtgtcggtcgac
tcgcagggcaagccggcgctgcgattggcgctgcaaacgcgcgagcagcacatccgccgc
gagaaggccacctcgaacatctgtaccgcgcaggcgctgctcgccatcatggccagcatg
tacgccgcgtatcacggcccgcagggcctgcgtgtaatcgccgagcgcgtgcaccgtctg
acggccgtgctggccgccggtcttgccgccctgggcgccgcgccgcgaaacgccacgttc
ttcgacacgctgaccgtgccggtggccggccgcgccgacagcattcacaccgtggccgcc
gcccgccgtttcaacctgcgtcgcgaggacgccgatacggtcggcatctcgctcgacgag
accagcacgcgcgacgacgtgatcgcgttgtgggaagtggtcgcagaggggctcggcaag
caagctgtctcgctggacttcgacgccatcgaagccaccgtctcgaacggttatccggcg
gcgctcgcgcgccagagcgcgtatctcacgcatccggtgttcaatcgctatcactccgag
cacgaaatgctgcgttacctgcgcagtctctcggacaaggatctggcgctcgatcgcacg
atgatcccgctcggctcgtgcacgatgaagctcaacgccacctcggagatgctgccggtg
acgtggccggaattcggccagattcacccgttcgccccggccgaccagacggtgggctac
cgcaccatgatcgaccagctcgagcgcatgctcgtggccgcgaccggctatgcggcggtg
tcgttgcagccgaacgccggctcgcagggcgagtacgcaggcctgctgatcattcaggcg
tatcacgcctcgcgcggcgaagcgcatcgcgacatctgcctgatcccggcgtcggcgcac
ggtaccaacccggcatcggcccagatggcgggcatgcaggtcgtggtggtcgcgtgcgat
gccaatggcaacgtcgatctggccgacctgcaggcgaaggccgagcagcatcgcgaccgc
ctggccgcgatcatgatgacatacccgtccacgcacggcgtgttcgaggcgggcgcgcgc
cagatctgcgaaatcgtgcatgcgaacggcggccaggtgtatgtcgacggcgccaacatg
aacgcgatggtcggcctgtgcgcacccggcgaattcggtggcgacgtgtcgcacctgaac
ctgcacaagacgttctgcattccgcacggcggcggcggccccggcgtggggccggtcgct
gtcggcgcccatctggcgaagttcctgccgaaccagcgttcgaccgggtattcgcgcgat
gccgaaggtatcggcgccgtgtcgggcgctccgtacggttcggcctcgatcctgccgatc
tcgtggatgtatgtggcgatgatgggtgcgaagggcctgacggccgccaccgaaaccgcc
attctcaacgccaactacctcgcgaagaagctcgcgccgcactacccggtgctgtacacc
gggccgggcgggctggtggcgcacgagtgcattctcgacctgcgtccgctcaaggacacc
agcggcatcaccgtcgacgacgtggccaagcgactgatggatttcggcttccatgcgccg
acgatgagcttcccggtgccgggcacgctgatggtcgagccgacggaatcggagtcgaag
cacgaactcgaccgcttcatcgaggcgatggtcacgatccgcgaggaaatccgcgcggtg
gaagagggacgcgcggaccgcgaggacaatccgctcaagcacgcgccgcacacggccgac
gtggtgaccgccgacgaatggacgcacgcctacgcgcgcagccaggcagcgtatccggtc
aaggcgctgcgcgagcgcaagtactggcctccggtcggacgcgccgacaacgtgtatggc
gaccggaacctgttctgcgcctgcgtgccgatgagcgactacgagtga
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