Pandoraea pnomenusa RB38: DA70_14670
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Entry
DA70_14670 CDS
T03067
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno03420
Nucleotide excision repair
ppno03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DA70_14670
03430 Mismatch repair
DA70_14670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppno03400
]
DA70_14670
Enzymes [BR:
ppno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DA70_14670
DNA repair and recombination proteins [BR:
ppno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DA70_14670
MMR (mismatch excision repair)
Other MMR factors
DA70_14670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AHN75568
UniProt:
A0A856LC30
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All DBs
Position
349633..351735
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AA seq
700 aa
AA seq
DB search
MSSQPTEPTQRHVSAGDPWADLNDRQREAVDYGVGDDGSPGGPLLVIAGAGSGKTSTLAH
RVANLIVRGADPNRILLLTFSRRAAGEMERRVGAVLQKVLGLASSQPPSLPWAGTFHAVG
ARLLRDFAPRIGLSEAFTIHDRSDAEDLLGLVRHDLGFSATQSRFPLKGTCLSIYSRVVN
SQAPLAEVLAKYFPWCAQWEAQLKALFGAYVDAKQSQQVLDYDDLLLYWAETMGEPALAR
ELDTRFDHVLVDEYQDTNRLQAQILLAMKPEGRGLTVVGDDAQSIYAFRAATIRNILDFP
GQFATPAHVVTLERNYRSTQPILDASNAVIAESSERYAKALWTDRQSTRLPQLVNVSDES
GQARWVADQVLAQRETGTRLMQQAVLFRTGSHSAALELELTRRNIPFVKFGGLKFLEAAH
VKDLLSILRWAHNPASRLSGFRVAQLIPGIGPVSATRLLDAMAQSATPAQVLAQFKPPSS
AAADWRAFVDVYMTLHDTRLAWPADVDLALRWYGPLLTQRFDDAAVRQADLEQLARIANT
YGSREQFLTELTLDPPDATSAQSGAPMLDEDYLILSTIHSAKGQEWHSVYVLNVVDGCIP
SDMSTGDDEDIEEERRLLYVAMTRARESLQLVVPQRFYVHQQTGLGDRHVYGTRSRFVPD
GMLPLYEIFPKPREDDAPRTPVGDVTVHIDVARKLRNAWS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcagccaaccgagccaacccagcgacacgttagcgctggcgatccctgggcc
gatctcaacgaccgacagcgcgaagccgtcgactacggtgtgggcgacgacggctcgccc
ggcgggccgctgctcgtcattgcgggtgcgggatcgggcaagacgagcaccctcgcgcat
cgcgtcgccaatctgatcgtgcgcggggcggatcccaaccgcatactgctgctgacattt
tcgcgccgggccgccggggagatggagcggcgcgtgggcgcggtgctgcagaaggtgctg
ggactcgcgtcgtctcaaccgccgtcgctgccgtgggcgggaacgttccacgcggtgggc
gcccggctgctgcgcgatttcgcccctcgcatcggcctgtcggaggccttcacgatccac
gatcgcagcgatgccgaggacctgctcggtctcgttcgccacgacctcggcttttccgcc
acccagtcgcgcttccccctcaaaggcacgtgtctgtcgatctattcgcgcgtggtgaac
agtcaggcgccgcttgccgaggtgctcgcgaagtattttccgtggtgcgcgcaatgggag
gcgcaactcaaggcgctgttcggcgcctatgtcgacgccaagcagtcgcagcaggtgctc
gactacgacgacttgctgctttactgggccgagacgatgggcgagccggcactcgcgcgc
gagctcgatacccgtttcgatcatgtgctcgtcgacgaataccaggacaccaaccggttg
caggcgcagattctgctcgcgatgaagcccgaggggcgtggcctgaccgtcgtcggtgac
gatgcgcagtcgatctacgcgtttcgcgcggccaccattcgcaacatcctcgacttcccc
gggcagttcgccacgcccgcgcacgtggtgacgctggagcgtaattaccggtcgacgcaa
ccgattctcgacgcgtccaatgccgtcatcgccgagtcgagcgagcgctatgcgaaggcg
ctgtggacggaccgccagtcgacgcggctgccgcagctcgtgaacgtgagcgacgaatcg
gggcaggcgcgatgggtcgccgatcaggtgctggcgcaacgcgagacgggcacacgcctg
atgcagcaagccgtgctgtttcgcaccggcagccacagcgccgcgctggagctggagctc
acgcgtcgcaatatccctttcgtgaaattcggcggactgaagtttctcgaggccgcgcac
gtcaaggacctgctgtcgatactgcgctgggcgcacaatccggcaagccgcttgtcgggc
ttccgcgtggcgcagttgatcccgggtatcggcccggtgagcgccacgcgtctgctcgac
gcgatggcccaatccgccacaccggcccaggtgctcgcgcagttcaagcccccgtcgtcg
gcggccgccgactggcgtgcgttcgtcgacgtctacatgacgctgcacgacacgcgtctg
gcatggccggccgacgtcgatctcgccctgcgctggtacggcccgctgctcacgcaacgg
ttcgacgacgccgccgtgcgtcaggccgatctcgaacagctcgcgcgcatcgccaatact
tacggctcgcgcgaacagttcctgaccgaactcaccctcgacccaccggatgccacgagc
gcgcaatcgggcgcgccgatgctcgacgaggattacctgatcctgtcgacgatccacagc
gcgaagggacaggagtggcattcggtctacgtgctcaacgtggtcgacgggtgcattccg
tccgacatgagcacgggagacgacgaggacatcgaggaagagcggcggttgctatacgtg
gcgatgacccgcgcgagggagtcgctgcaactggtcgtgccgcagcgcttttacgtgcat
cagcaaacgggactcggcgaccggcacgtctatggcacgcgaagccgtttcgtgccggac
ggcatgctgccgctgtacgaaatctttccgaagccgagagaggacgacgcgccccgcacg
ccggtgggcgacgtgacggttcacatcgatgtcgcgaggaaactgcgtaatgcctggtcc
tga
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