Paenibacillus polymyxa M1: PPM_0025
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Entry
PPM_0025 CDS
T01968
Symbol
rnmV
Name
(GenBank) primase-related protein
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
ppo
Paenibacillus polymyxa M1
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PPM_0025 (rnmV)
Enzymes [BR:
ppo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
PPM_0025 (rnmV)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
Toprim_3
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
CCC82962
LinkDB
All DBs
Position
31779..32324
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AA seq
181 aa
AA seq
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MIKEVIVVEGRDDTVAIRRAVEADTIETGGSAINKMTLRKIALAQERRGVIILTDPDHAG
ERIRKIIASKVPGCKQAFIPEAEATRKGDIGVENASPEAIRHALARVHTTVEGAEPLIEM
ADLIDAGLITHPNAAARRMALGNVLGIGYCNGKQLHKRLSVFQISREEFASALAQIESEG
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaggaagtgatcgtggtggaaggccgggatgatacggtagccattcgccgtgct
gtcgaagcagatacgatagaaactggcggttcagccattaataaaatgacgctgcggaaa
attgcattggcgcaggaacggcggggggtcattattttaactgatcccgatcatgcaggg
gagcgtatccgtaaaattatcgcctccaaggtccccggctgcaagcaggcttttatacct
gaggcagaggcgacacgcaaaggggatattggcgtggagaatgcctccccggaagccatc
agacacgctctcgcgcgggtacatacgacagtggaaggcgccgaaccgctgattgaaatg
gcggacctgattgacgctggacttattactcaccccaatgctgctgcacgccgtatggcc
ttggggaatgtactgggtattggctattgtaacggaaagcagctacataagcggctctct
gtatttcagatcagtcgtgaggaatttgccagtgcgctggcacaaatcgaaagtgaagga
ttgtga
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