KEGG   Paenibacillus polymyxa M1: PPM_4456Help
Entry
PPM_4456          CDS       T01968                                 

Gene name
tuf
Definition
(GenBank) elongation factor EF-Tu
  KO
K02358  elongation factor Tu
Organism
ppo  Paenibacillus polymyxa M1
Brite
KEGG Orthology (KO) [BR:ppo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:ppo03012]
    PPM_4456 (tuf)
   03029 Mitochondrial biogenesis [BR:ppo03029]
    PPM_4456 (tuf)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppo04147]
    PPM_4456 (tuf)
Translation factors [BR:ppo03012]
 Eukaryotic Type
  Elongation factors
   PPM_4456 (tuf)
 Prokaryotic Type
   PPM_4456 (tuf)
Mitochondrial biogenesis [BR:ppo03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial translation factors
    PPM_4456 (tuf)
Exosome [BR:ppo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PPM_4456 (tuf)
  Exosomal proteins of breast cancer cells
   PPM_4456 (tuf)
  Exosomal proteins of colorectal cancer cells
   PPM_4456 (tuf)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 cobW RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID: CCI71263
LinkDB All DBs
Position
complement(5158912..5160102)
Genome map
AA seq 396 aa AA seqDB search
MAKAKFERNKPHVNIGTIGHVDHGKTTLTAAITTVLSKTYGGAAVAFDQIDKAPEERERG
ITISTAHVEYETPNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHI
LLSRQVGVPYIVVFLNKCDMVEDEELLELVEMEVRDLLSEYDFPGDDTPITRGSAREALQ
NPDGDWAKKIVEMFETIDTYIPTPERDTDKPFLMPVEDVFSITGRGTVATGRVERGTVKV
GDEIEIIGIQEESRKSVVTGVEMFRKLLDSAQAGDNIGALLRGVDRAQIERGQVLAKPGS
VNPHTEFSAQIYVLTKEEGGRHKPFFTGYRPQFYFRTTDVTGIITLPEGSEMVMPGDNIT
VTVQLISPIAIEEGTKFSIREGGRTVGAGAVATISK
NT seq 1191 nt NT seq  +upstreamnt  +downstreamnt
atggcaaaggctaagtttgaacgtaacaaaccgcacgttaatatcggtacaattggtcac
gtcgatcatggtaaaacaactttgactgctgcaatcacaactgtactttccaaaacttac
ggtggtgctgctgtagcattcgatcaaatcgataaagctccagaagagcgcgaacgcggt
atcacaatctccactgcacacgtggaatacgaaacgcctaaccgtcactatgcacacgtt
gactgcccaggtcacgccgactatgttaaaaacatgatcactggcgctgcacaaatggac
ggagcgattctggttgtatccgcagctgacggtcctatgccgcaaactcgcgaacacatc
ctcttgtcccgtcaagtaggtgttccatacatcgttgtattcctgaacaaatgcgacatg
gttgaagacgaagagttgctggaattggttgaaatggaagttcgcgacttgctgagcgag
tatgacttcccaggcgacgacactccaatcactcgtggttccgctcgtgaagcactgcaa
aacccagatggcgactgggctaagaaaatcgttgaaatgttcgaaacaatcgacacttac
atcccaactccagaacgcgacactgacaagcctttccttatgcctgtcgaggacgtattc
tccatcactggtcgtggtacagttgctacaggccgtgtagagcgtggtactgttaaagtg
ggcgacgaaatcgaaatcatcggtattcaagaagaatcccgtaaatccgtagtaacaggc
gtagaaatgttccgtaaattgcttgactccgctcaagctggtgacaacatcggcgcactg
cttcgcggtgtagatcgtgcacaaatcgagcgtggccaagtattggctaaaccaggttct
gttaacccacatacagaattctctgctcaaatctacgttttgactaaagaagaaggcgga
cgtcacaaacctttcttcactggttaccgtccacagttctacttccgtacaactgacgta
actggtatcattactctgccagaaggttccgaaatggtaatgcctggtgataacattacg
gttactgttcaactgatcagcccaatcgcgattgaagaaggaactaagttctccattcgt
gaaggtggacgtacagttggtgcaggcgctgtagcaacaatctccaaataa

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