KEGG   Paenibacillus polymyxa Sb3-1: RE92_22570
Entry
RE92_22570        CDS       T03812                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
ppoy  Paenibacillus polymyxa Sb3-1
Brite
KEGG Orthology (KO) [BR:ppoy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppoy03032]
    RE92_22570 (gyrB)
   03036 Chromosome and associated proteins [BR:ppoy03036]
    RE92_22570 (gyrB)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ppoy02048]
    RE92_22570 (gyrB)
Enzymes [BR:ppoy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     RE92_22570 (gyrB)
DNA replication proteins [BR:ppoy03032]
 Prokaryotic type
  DNA Topoisomerases
   RE92_22570 (gyrB)
Chromosome and associated proteins [BR:ppoy03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    RE92_22570 (gyrB)
Prokaryotic defense system [BR:ppoy02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    RE92_22570 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 MHB
Other DBs
NCBI-ProteinID: AJE53651
LinkDB
Position
5117470..5119449
AA seq 659 aa
MVDKIDLSAGASGTQNGASEYGADDIQVLEGLVAVRKRPGMYIGSTSSSGLHHLVWEIVD
NAVDEHLAKFCSRIDITMHKDGSVTVSDNGRGIPTGMHKMGIPTPQVVFTILHAGGKFGG
SGYKKSGGLHGVGASVTNALSEWLEVEIYRDGKIHRQRFEYWQDKKGVEHVGEPTTGLEV
LGNTNKTGSKITFKPDIRVFQSGIHFNYDTLAERLQEIAFLNSGLRIQLKDERSGKSDEY
FYEGGASQFVSFLNEGKDVLHDVIHFNAEKEDIEVEIAIQYNAGYTETIASFVNSIPTRG
GGTHETGFKTAYTRIMNDYARKTAMLKEKDKNLEGNDLREGMMAVISVKMAEVEFVGQTK
DQLGSASARSTVDAIVSEQMQRFLEENPQIAQTLIRKAVQASKAREAARKARDEMRSGKK
RSESSNLNGKLSPAQSKDFTRNELFIVEGDSAGGSAKQGRDSKIQAILPLKGKPMNPEKS
KLADIMKNDEYRAITAAIGAGVGTEFTLEDSNYSKIIIMTDADTDGAHIQVLLLTFFYRY
MKELIDAGRIFIAQPPLYKITRKSGKLETVRYAWTDEQLDNYLKEFGRNFELQRYKGLGE
MNPDQLWETTMNPESRTLLRVQIEDAAKAERRVSTLMGDKVDPRKRWIVENVDFTEYVE
NT seq 1980 nt   +upstreamnt  +downstreamnt
atggtcgacaaaatcgacttgtctgcgggagcttccggtacacagaacggagcttcagaa
tatggcgcggacgacattcaagtgctcgaagggcttgtggcagttcgcaaacggccgggc
atgtacatcgggagcaccagttcttcgggactgcatcatttggtatgggaaattgtagac
aacgcggtggatgaacatctcgccaagttttgctctcgcattgatatcacaatgcataag
gacggttctgttacagtatcagacaacgggcgcggtattcctacgggaatgcacaaaatg
ggaattcctacgcctcaagttgtattcaccattttgcacgccggaggtaagtttggcggt
tcgggatataaaaagtccgggggtctgcatggggtaggtgcgtctgtaacgaacgctctt
tcggaatggcttgaagtggaaatctaccgggacggcaagattcatcgtcagcggtttgaa
tattggcaggacaagaagggcgtggagcatgtcggtgaaccgaccacaggccttgaagtg
ctgggcaatactaacaagacgggctcaaaaattacatttaaaccggatattcgcgttttt
cagtcaggaattcattttaactacgatacgctggctgaacgccttcaggaaattgctttt
ctgaattccggccttcgtattcagcttaaagacgagcgcagcggaaagtcagatgaatat
ttttatgagggtggagcaagtcagtttgtttcttttttgaatgagggtaaggatgtattg
catgatgttattcactttaatgccgagaaagaagacattgaagtggagattgccatccaa
tacaatgccggctacacagagacgattgcttcgttcgttaactccattccgacacgtggc
gggggtacgcatgaaacaggcttcaaaaccgcttacactcgtatcatgaacgactatgca
cgcaaaacagcgatgttgaaggaaaaggataaaaacctggagggtaacgatctgcgtgag
ggtatgatggctgtaatcagtgtcaaaatggccgaggttgaatttgtcggtcagacaaaa
gatcagctgggtagtgcttcggcgcggagtacagtggatgccatcgtatctgaacaaatg
cagcgctttttggaggaaaatccacagatagcgcaaaccttgatcagaaaggcagttcaa
gcatccaaagcgcgtgaagctgcacgtaaggctcgggacgaaatgcgttctggcaagaaa
cgcagtgaaagttctaatttgaatggcaaactgtcgcctgcgcagtccaaggattttaca
cgtaatgagttatttatcgtggaaggcgattcggctggaggatcggccaaacaaggacgg
gattccaaaatccaggcaattttgccgttaaagggcaagccgatgaatccggaaaaatca
aagttggcggatattatgaaaaatgatgagtatcgtgcgattacggcagcgattggcgcg
ggggtaggaactgagttcacgctggaagacagcaattattccaaaatcatcattatgacc
gatgcagatacagatggcgcgcacattcaagtactgttgttgacgttcttttatcggtac
atgaaagaactcattgatgcaggacgcatatttattgctcagccgccattgtataaaata
acccgcaagtcgggtaagctcgaaacggttcgttatgcctggactgacgagcagcttgat
aattacttaaaagaatttggacggaattttgagcttcaacgttataaaggactcggggag
atgaaccctgatcagttatgggaaacgacaatgaatcccgagtcacgcaccctgttgcgc
gttcagattgaggatgctgccaaagctgaacgccgtgtgtccacattgatgggtgataag
gtggatccacgtaagcgctggatcgtggaaaacgtggatttcacggaatacgtagagtag

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