Physcomitrium patens (spreading earthmoss): 112274403
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Entry
112274403 CDS
T01041
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00061
Fatty acid biosynthesis
ppp00071
Fatty acid degradation
ppp01100
Metabolic pathways
ppp01212
Fatty acid metabolism
ppp04146
Peroxisome
Module
ppp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112274403
00071 Fatty acid degradation
112274403
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112274403
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppp01004
]
112274403
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112274403
Enzymes [BR:
ppp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112274403
Lipid biosynthesis proteins [BR:
ppp01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
112274403
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of breast milk
112274403
Exosomal proteins of breast cancer cells
112274403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
112274403
NCBI-ProteinID:
XP_024359634
LinkDB
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Position
21:complement(1557954..1567453)
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AA seq
707 aa
AA seq
DB search
MEADPLVMETTQDRRMRIVNAHLQMRASEERPQLENQPTAAEYIVEEVYSVKLPEKLSTG
KWNVHRSVLSPLELMDHWPEHPEIRTLHDNFVYAKGAFAENKCMGTRIREDGTIGEYRWM
TYGEVGTARTAIGSGLVQHGIPKGSCVGIYMINRAEWVISELACVAYSYVSVPLYDTLGA
DAVTYIVNHAEVAAVFCTPDKLQTLLSCLAELPSLRLIVVVGGAENLVPSLPPQSGVEIM
PYSRLEAQGKADQRAFVAPKPHDLATICYTSGTTGVPKGAMISHHNLVASAAGSSQSTPI
YPSDVHISYLPLAHIYERMNMLVMLHHGVAVGFYQGDILKLMDDMETLKPTIFASVPRLY
NRIYDKITGTVKASGGLREKLFNVAYNAKKQALEKGKSPSPMWDRLVFNKVKAALGGRVR
IILSGASPISPDVLDFLRICFGGFVSEGYGMTETSCLIAGSQRGDNTSGHVGAPSPSCEV
KLADVPEMEYTNDDKPYPRGEICVRGPTLFKGYYKDEVQTREIFDEEGWLHTGDIGCWLP
GGRLKIIDRKKNIFKLAQGEYIAPEKIENVYLRSRFITQCYIHGDSFNSSLVAVAVVDPE
TLSAWAKSRGMKHSDDLKRLCDDPVVRVAVLADMNTVGREAQLRGFEFAKAVTLIPEPFS
IENGLLTPTLKVKRPQAKARFATAIAEMYSEIAAKEESHLPLRSSKL
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggatcccctggtaatggagaccacacaagacaggcggatgcgcatcgtgaat
gcacatttgcagatgagggcctcagaggagcgtccacaactggagaatcaaccaacggct
gccgaatatatcgtagaggaagtatacagtgtaaagctgccggagaaattgagcacggga
aagtggaacgttcacagatcagtgctgagcccccttgagctcatggatcattggcctgaa
cacccagagattagaactctgcacgacaactttgtgtacgcgaagggggcctttgcagag
aacaaatgtatgggaactcgtatccgagaggatggtacaattggcgagtataggtggatg
acttatggagaggtaggaacggcacgcactgcgattggatcaggtcttgttcagcatggt
atccctaagggttcatgtgttggaatatacatgatcaatcgagcagaatgggtcatctca
gaactagcatgtgtcgcttattcctatgtgtctgttccactttatgacactcttggagct
gatgctgtgacatacattgtcaaccatgctgaagtcgctgctgtgttttgtaccccagac
aaattgcagactttactgagttgtcttgcggaactgccaagtttacggctcattgtggtt
gtgggaggtgctgagaatttagtgccttcactcccaccccagtcaggggttgaaattatg
ccttactctcgactcgaagctcagggtaaagcagatcagcgagcatttgtggcaccaaag
ccacatgatctagctactatatgttacacaagtggtactactggtgttcccaagggagca
atgatatctcaccacaaccttgtcgcaagcgctgctgggagtagccaatctacacctatc
tacccctctgacgtgcatatctcgtatctgccacttgctcatatttacgagaggatgaac
atgcttgtcatgctgcatcatggtgtggcagttggtttctatcaaggagatattttgaag
ctaatggatgatatggaaaccttgaaacctacaatattcgccagtgtaccacgtctttat
aatcgcatttatgataaaatcacgggaacagtgaaggcttcaggtggactacgtgagaag
ctgtttaacgttgcctacaatgcaaagaaacaagcacttgagaagggaaaatctccttca
cccatgtgggaccggttggtttttaacaaagtgaaggcagctcttgggggacgagttcgt
atcatcttgtcaggcgcatcaccaatatccccagatgttctggacttcttaagaatttgt
tttggtggttttgtttctgaaggctatggaatgacggaaacgtcgtgcctgattgctggc
tctcaacgcggagacaacacatctgggcacgttggagccccaagcccatcttgcgaggtt
aagcttgctgatgttccggagatggaatacactaacgacgacaaaccttacccgcgagga
gaaatctgtgttcgaggccccacattgttcaaaggctactacaaagatgaagttcaaaca
cgggagatttttgatgaagagggctggttacatactggtgatattgggtgttggttgcca
ggtggtcggctcaaaatcatcgacaggaagaagaatatctttaagttggctcaaggagag
tacattgccccggagaagatcgagaatgtctaccttcgcagtcgtttcataacacagtgt
tacatacatggtgatagtttcaactcgagtcttgtggcagttgctgtcgttgatccagag
actctgtctgcctgggcaaaatcgaggggtatgaagcactcagatgatttgaagcggcta
tgtgatgatcctgttgtacgagtggctgtgcttgcggatatgaatactgtcggtcgcgaa
gcacagttgcgaggttttgagtttgccaaagctgtgacgttgattcctgaaccattctca
atagaaaatggattgcttacacccacgctcaaggtgaagcgaccccaagctaaggctcgc
tttgcaacggccattgcagaaatgtattctgagattgcagctaaggaggaatctcacctg
ccgttgcgatccagcaagttgtaa
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